RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CDK4P11802 303 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 FGFR3P22607 806 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 BCAP31P51572 246 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 DLG1Q12959 904 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 BTG3Q14201 252 aaPredicted RBP8.74□□□□□ -1.01
NDE1-202ENST00000396355 RASA2Q15283 850 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 FAM83BQ5T0W9 1011 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 CENPSQ8N2Z9 138 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 RNF25Q96BH1 459 aaPredicted RBP8.74□□□□□ -1.01
NDE1-202ENST00000396355 SIPA1Q96FS4 1042 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 OTUD5Q96G74 571 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 DMRTB1Q96MA1 342 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 INPP4AQ96PE3 977 aaPredicted RBP8.74□□□□□ -1.01
NDE1-202ENST00000396355 PAGR1Q9BTK6 254 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 HERC2P3Q9BVR0 1158 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 OSBPL8Q9BZF1 889 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 SLITRK6Q9H5Y7 841 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 ATP13A3Q9H7F0 1226 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 ARL8BQ9NVJ2 186 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 ADA2Q9NZK5 511 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 PCDH10Q9P2E7 1040 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 ATP6V1HQ9UI12 483 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 UBE4BO95155 1302 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 MYO3BQ8WXR4 1341 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 MYH4Q9Y623 1939 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 A0A1W2PQ72 361 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 C5orf60A6NFR6 353 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 ZNF839A8K0R7 811 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 BCL10O95999 233 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 PEX2P28328 305 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 STAT1P42224 750 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 MLLT3P42568 568 aaPredicted RBP8.74□□□□□ -1.01
NDE1-202ENST00000396355 GSTM4Q03013 218 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 TUBA3CQ13748 450 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 HERC4Q5GLZ8 1057 aaPredicted RBP8.74□□□□□ -1.01
NDE1-202ENST00000396355 PAOXQ6QHF9 649 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 NSMFQ6X4W1 530 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 SV2BQ7L1I2 683 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 ALDH16A1Q8IZ83 802 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 TSPAN14Q8NG11 270 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 RAET1EQ8TD07 263 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 PPP4R1Q8TF05 950 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 GLMNQ92990 594 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 NRBF2Q96F24 287 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 AK8Q96MA6 479 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 ZFYVE28Q9HCC9 887 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 RPRD1BQ9NQG5 326 aaKnown RBP8.74□□□□□ -1.01
NDE1-202ENST00000396355 PI4KBQ9UBF8 816 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 FIS1Q9Y3D6 152 aa8.74□□□□□ -1.01
NDE1-202ENST00000396355 A0A087X0T9 212 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 GSC2O15499 205 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 RGS20O76081 388 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 FAM228BP0C875 321 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 IL1R1P14778 569 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 ATF7P17544 494 aaPredicted RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 WEE1P30291 646 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 SLC25A3Q00325 362 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 OCRLQ01968 901 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 SP3Q02447 781 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 PDIA2Q13087 525 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 PPP2R5EQ16537 467 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 PPP6R3Q5H9R7 873 aaPredicted RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 SYCP2LQ5T4T6 812 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 HGSNATQ68CP4 663 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 CENPPQ6IPU0 288 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 ADCK1Q86TW2 530 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 RASAL3Q86YV0 1011 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 LRRC47Q8N1G4 583 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 CD99L2Q8TCZ2 262 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 DIS3LQ8TF46 1054 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 ASB12Q8WXK4 309 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 MAGEB18Q96M61 343 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 TBCBQ99426 244 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 SENP7Q9BQF6 1050 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 TMEM79Q9BSE2 394 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 APOL6Q9BWW8 343 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 CADM1Q9BY67 442 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 FGFBP2Q9BYJ0 223 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 SEMA6AQ9H2E6 1030 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 C6orf50Q9HD87 102 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 ABCB10Q9NRK6 738 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 STX18Q9P2W9 335 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 ATPIF1Q9UII2 106 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 SALL4Q9UJQ4 1053 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 DMTF1Q9Y222 760 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 GIT1Q9Y2X7 761 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 GPSM3Q9Y4H4 160 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 SRRM3A6NNA2 597 aaPredicted RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 WNT10BO00744 389 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 CDH16O75309 829 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 DLATP10515 647 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 ENO3P13929 434 aaPredicted RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 SEPHS1P49903 392 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 LSM3P62310 102 aaKnown RBP8.73□□□□□ -1.01
NDE1-202ENST00000396355 ITGA9Q13797 1035 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 PPP2R5DQ14738 602 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 PARP6Q2NL67 630 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 PLA2G4EQ3MJ16 856 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 TIGD2Q4W5G0 525 aa8.73□□□□□ -1.01
NDE1-202ENST00000396355 PPM1LQ5SGD2 360 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms