RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 OR6B2Q6IFH4 312 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 CAPRIN2Q6IMN6 1127 aaKnown RBP9.7□□□□□ -0.86
NDE1-201ENST00000396354 PDIK1LQ8N165 341 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 PDCD7Q8N8D1 485 aaKnown RBP9.7□□□□□ -0.86
NDE1-201ENST00000396354 TMEM35BQ8NCS4 154 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 EXD1Q8NHP7 514 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 MORC4Q8TE76 937 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 USP6NLQ92738 828 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 P3H4Q92791 437 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 FAF2Q96CS3 445 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 FAM161BQ96MY7 647 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 CGRRF1Q99675 332 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 APOL6Q9BWW8 343 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 ARL8BQ9NVJ2 186 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 PSMC3IPQ9P2W1 217 aaPredicted RBP9.7□□□□□ -0.86
NDE1-201ENST00000396354 USH1CQ9Y6N9 552 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 SCINQ9Y6U3 715 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 NOP56O00567 594 aaKnown RBP9.7□□□□□ -0.86
NDE1-201ENST00000396354 KCNN4O15554 427 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 SAT1P21673 171 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 MAN1A1P33908 653 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 ZNF268Q14587 947 aaPredicted RBP9.7□□□□□ -0.86
NDE1-201ENST00000396354 KHDC1Q4VXA5 237 aaKnown RBP9.7□□□□□ -0.86
NDE1-201ENST00000396354 CELF3Q5SZQ8 465 aaKnown RBP9.7□□□□□ -0.86
NDE1-201ENST00000396354 C12orf50Q8NA57 414 aaPredicted RBP9.7□□□□□ -0.86
NDE1-201ENST00000396354 FBXO27Q8NI29 283 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 CCDC110Q8TBZ0 833 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 RBM41Q96IZ5 413 aaKnown RBP9.7□□□□□ -0.86
NDE1-201ENST00000396354 CPXM1Q96SM3 734 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 CYP4F11Q9HBI6 524 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 PCMTD2Q9NV79 361 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.7□□□□□ -0.86
NDE1-201ENST00000396354 SEPT10Q9P0V9 454 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 CLUHO75153 1309 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 SRRM3A6NNA2 597 aaPredicted RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 GSTA1P08263 222 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 UBTFL6P0CB48 400 aaPredicted RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 TROVE2P10155 538 aaKnown RBP eCLIP9.69□□□□□ -0.86
NDE1-201ENST00000396354 MYL2P10916 166 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 TUBP50607 506 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 GTF2A2P52657 109 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 ZNF132P52740 706 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 VCPP55072 806 aaKnown RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 TMPRSS15P98073 1019 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 CDCA2Q69YH5 1023 aaPredicted RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 CES3Q6UWW8 571 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 MAMDC4Q6UXC1 1216 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 PRPF39Q86UA1 669 aaKnown RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 ARID3BQ8IVW6 561 aaPredicted RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 POU5F2Q8N7G0 328 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 SHKBP1Q8TBC3 707 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 UCMAQ8WVF2 138 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 SEPT1Q8WYJ6 367 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 CPT1BQ92523 772 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 CPB2Q96IY4 423 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 TWNKQ96RR1 684 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 MMP19Q99542 508 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 ACO2Q99798 780 aaKnown RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 TSSK1BQ9BXA7 367 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 DONSONQ9NYP3 566 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 CYTH4Q9UIA0 394 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 KCNH4Q9UQ05 1017 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 IGKV6-21A0A0C4DH24 114 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 PSTPIP1O43586 416 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 DKC1O60832 514 aaKnown RBP eCLIP9.69□□□□□ -0.86
NDE1-201ENST00000396354 TOM1L1O75674 476 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 OAS1P00973 400 aaKnown RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 HOXC6P09630 235 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 ZCCHC18P0CG32 403 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 CCND1P24385 295 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 PTDSS1P48651 473 aaKnown RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 PGGT1BP53609 377 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 ATXN1P54253 815 aaKnown RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 ARL4CP56559 192 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 GEMIN4P57678 1058 aaKnown RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 KRT81Q14533 505 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 THEMIS2Q5TEJ8 643 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 C16orf46Q6P387 395 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 SESTD1Q86VW0 696 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 ERO1BQ86YB8 467 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 KATNAL2Q8IYT4 538 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 WDTC1Q8N5D0 677 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 ALLCQ8N6M5 410 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 GBP7Q8N8V2 638 aaPredicted RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 CFAP61Q8NHU2 1237 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 KCNN1Q92952 543 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 MOCOSQ96EN8 888 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 SERAC1Q96JX3 654 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 MANSC1Q9H8J5 431 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 ARHGEF3Q9NR81 526 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 PLXNA1Q9UIW2 1896 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 hCG_1818297A0A087WSY0 165 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 TMEM191CA6NGB0 347 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 TRIM49D1C9J1S8 452 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 HCRTO43612 131 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 EDF1O60869 148 aaKnown RBP9.69□□□□□ -0.86
NDE1-201ENST00000396354 LRCH4O75427 683 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 USP1O94782 785 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 HAUS5O94927 633 aa9.69□□□□□ -0.86
NDE1-201ENST00000396354 ITGB3P05106 788 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms