RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 MAP2K5Q13163 448 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 ANKRD20A8PQ5CZ79 823 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 ARCQ7LC44 396 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 LIMS2Q7Z4I7 341 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 TAX1BP1Q86VP1 789 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 PACS2Q86VP3 889 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 CRYBG2Q8N1P7 616 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 C2orf69Q8N8R5 385 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 ANKRD42Q8N9B4 389 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 FAM71DQ8N9W8 422 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 ATP11CQ8NB49 1132 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 MGARPQ8TDB4 240 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 NXF3Q9H4D5 531 aaKnown RBP17.54■□□□□ 0.4
NUP50-202ENST00000396096 GDAP2Q9NXN4 497 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 GINS2Q9Y248 185 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 CAPN7Q9Y6W3 813 aa17.54■□□□□ 0.4
NUP50-202ENST00000396096 PIK3R2O00459 728 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 MDM4O15151 490 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 PAPSS1O43252 624 aaPredicted RBP17.53■□□□□ 0.4
NUP50-202ENST00000396096 SNX3O60493 162 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 ZNF865P0CJ78 1059 aaPredicted RBP17.53■□□□□ 0.4
NUP50-202ENST00000396096 KCNE1P15382 129 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 TGM2P21980 687 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 IL4RP24394 825 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 PTPN9P43378 593 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 PDE4CQ08493 712 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 FNBP1LQ5T0N5 605 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 CNPY4Q8N129 248 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 FAF2Q96CS3 445 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 RTP4Q96DX8 246 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 MAGEB18Q96M61 343 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 ELAC2Q9BQ52 826 aaKnown RBP17.53■□□□□ 0.4
NUP50-202ENST00000396096 FAM49BQ9NUQ9 324 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 GJD2Q9UKL4 321 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 HES2Q9Y543 173 aa17.53■□□□□ 0.4
NUP50-202ENST00000396096 FAM47DPA6NHR8 397 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 TCP11X1B4DZS4 312 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 GRAP2O75791 330 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.4
NUP50-202ENST00000396096 TMEM63AO94886 807 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 DESP17661 470 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 PNPLA4P41247 253 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 PSEN2P49810 448 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 GAD2Q05329 585 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 HIC1Q14526 733 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 KRT81Q14533 505 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 SNX17Q15036 470 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 MSS51Q4VC12 460 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 FBXO47Q5MNV8 452 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 SLC9A4Q6AI14 798 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 TLK2Q86UE8 772 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 ANKRD52Q8NB46 1076 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 OR6B3Q8NGW1 331 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 PYROXD1Q8WU10 500 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 FAM172AQ8WUF8 416 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 KBTBD7Q8WVZ9 684 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 ZNF560Q96MR9 790 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 DHRS4Q9BTZ2 278 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 C11orf84Q9BUA3 381 aaPredicted RBP17.52■□□□□ 0.4
NUP50-202ENST00000396096 TRIM6Q9C030 488 aaPredicted RBP17.52■□□□□ 0.4
NUP50-202ENST00000396096 PCDH18Q9HCL0 1135 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 PSMC3IPQ9P2W1 217 aaPredicted RBP17.52■□□□□ 0.4
NUP50-202ENST00000396096 RABGEF1Q9UJ41 708 aa17.52■□□□□ 0.4
NUP50-202ENST00000396096 SMIM28A0A1B0GU29 152 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 CFAP69A5D8W1 941 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 GOLGA8MH3BSY2 632 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 XPOTO43592 962 aaKnown RBP17.52■□□□□ 0.39
NUP50-202ENST00000396096 BCAT1P54687 386 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 RNASELQ05823 741 aaKnown RBP17.52■□□□□ 0.39
NUP50-202ENST00000396096 BST2Q10589 180 aaKnown RBP17.52■□□□□ 0.39
NUP50-202ENST00000396096 CDO1Q16878 200 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 ZC3H12AQ5D1E8 599 aaKnown RBP17.52■□□□□ 0.39
NUP50-202ENST00000396096 GLRA4Q5JXX5 417 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 HP1BP3Q5SSJ5 553 aaPredicted RBP17.52■□□□□ 0.39
NUP50-202ENST00000396096 PRAMEF19Q5SWL8 479 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 UBXN11Q5T124 520 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 OLFML2BQ68BL8 750 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 DARS2Q6PI48 645 aaKnown RBP17.52■□□□□ 0.39
NUP50-202ENST00000396096 NPNTQ6UXI9 565 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 SLC26A9Q7LBE3 791 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 PQLC3Q8N755 202 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 PLD5Q8N7P1 536 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 DENND1AQ8TEH3 1009 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 CENPIQ92674 756 aaPredicted RBP17.52■□□□□ 0.39
NUP50-202ENST00000396096 WDR83Q9BRX9 315 aaKnown RBP17.52■□□□□ 0.39
NUP50-202ENST00000396096 ZNF670Q9BS34 389 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 ACSS3Q9H6R3 686 aa17.52■□□□□ 0.39
NUP50-202ENST00000396096 SSU72Q9NP77 194 aaKnown RBP17.52■□□□□ 0.39
NUP50-202ENST00000396096 XPO7Q9UIA9 1087 aaKnown RBP17.52■□□□□ 0.39
NUP50-202ENST00000396096 SMG5Q9UPR3 1016 aaKnown RBP17.52■□□□□ 0.39
NUP50-202ENST00000396096 TCRBV7S3A2A0A539 114 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 A8MXQ7 604 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 POC1B-GALNT4F8VUJ3 575 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 DNM1LO00429 736 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 STX2P32856 288 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 GEMIN4P57678 1058 aaKnown RBP17.51■□□□□ 0.39
NUP50-202ENST00000396096 ATP11AP98196 1134 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 KCNJ11Q14654 390 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 ANKMY2Q8IV38 441 aa17.51■□□□□ 0.39
NUP50-202ENST00000396096 SCUBE3Q8IX30 993 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms