RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 IZUMO3Q5VZ72 239 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 CYP4F22Q6NT55 531 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 RETSATQ6NUM9 610 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 PGAP2Q9UHJ9 254 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 A0A1W2PQ67 120 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 USP27XA6NNY8 438 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SPRP35270 261 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 FLT3LGP49771 235 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 KCNMA1Q12791 1236 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 FSTL1Q12841 308 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TDRD10Q5VZ19 366 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 IL31RAQ8NI17 732 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF512Q96ME7 567 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TSEN34Q9BSV6 310 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 IL22Q9GZX6 179 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 FAM105AQ9NUU6 356 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 HDAC6Q9UBN7 1215 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 GGA2Q9UJY4 613 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 IGKV6D-21A0A0A0MT36 114 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 COPEO14579 308 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ACO1P21399 889 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 XPAP23025 273 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 HSPA9P38646 679 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ARL1P40616 181 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SCNN1GP51170 649 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 JAM2P57087 298 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 PRAMEP78395 509 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM139Q8IV31 216 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ATP6V0D2Q8N8Y2 350 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TTC8Q8TAM2 541 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SPPL2BQ8TCT7 592 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 CPA5Q8WXQ8 436 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 RILPQ96NA2 401 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 CDT1Q9H211 546 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 MLNP12872 115 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 AARSP49588 968 aaKnown RBP eCLIP3.52□□□□□ -1.852e-7■■■■□ 26.2
VPS13C-203ENST00000395896 VCPP55072 806 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 MXRA7P84157 204 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 IKBKEQ14164 716 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TARBP2Q15633 366 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 AARS2Q5JTZ9 985 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 APTXQ7Z2E3 356 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 GPATCH11Q8N954 259 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TEKT4Q8WW24 435 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 RNF25Q96BH1 459 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 CHMP6Q96FZ7 201 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 FUT8Q9BYC5 575 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TLR8Q9NR97 1041 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 DDIT4Q9NX09 232 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 MIA3Q5JRA6 1907 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 PAPPA2Q9BXP8 1791 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 COL11A2P13942 1736 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SMIM22K7EJ46 135 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SYN3O14994 580 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ABL1P00519 1130 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 URODP06132 367 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 PLEKP08567 350 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 NUDT17P0C025 328 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TAC1P20366 129 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 MRPS6P82932 125 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ASTE1Q2TB18 679 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 PLEKHA7Q6IQ23 1121 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TFB1MQ8WVM0 346 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 IRGQQ8WZA9 623 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 POP5Q969H6 163 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 OSGEPQ9NPF4 335 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 OTOFQ9HC10 1997 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ARHGAP42A6NI28 874 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 OR6C75A6NL08 312 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 CYB561D2O14569 222 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 AP5Z1O43299 807 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 AP1G2O75843 785 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SEC31AO94979 1220 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 CHKAP35790 457 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 VSNL1P62760 191 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SLC6A3Q01959 620 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 RPS6KA2Q15349 733 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ATPAF2Q8N5M1 289 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ACBD6Q9BR61 282 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SNX24Q9Y343 169 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 CDY2AQ9Y6F7 541 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 CDY1Q9Y6F8 540 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 POC1B-GALNT4F8VUJ3 575 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 CDK7P50613 346 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 NAB1Q13506 487 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SLC29A2Q14542 456 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 LRRC8EQ6NSJ5 796 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 BBS12Q6ZW61 710 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 WNT8BQ93098 351 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SORCS3Q9UPU3 1222 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ADCY6O43306 1168 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ABHD2P08910 425 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 KCNE1P15382 129 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 NDST1P52848 882 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 EPHB1P54762 984 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 POLR2LP62875 67 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 INCA1Q0VD86 236 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 PTK6Q13882 451 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TBCCQ15814 346 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SLC25A52Q3SY17 297 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms