RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 NEU2Q9Y3R4 380 aa14.07□□□□□ -0.16
CLIC1-209ENST00000395892 NLRC5Q86WI3 1866 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 NRP1O14786 923 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 AP1G2O75843 785 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 RNF8O76064 485 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 KRT1P04264 644 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 FYNP06241 537 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 KRT7P08729 469 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 FAM153BP0C7A2 387 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 FAM200BP0CF97 657 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 GJC1P36383 396 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 FNTAP49354 379 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 CDR1P51861 262 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 HDAC4P56524 1084 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 MAP3K7CLP57077 242 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 MRPS5P82675 430 aaKnown RBP14.06□□□□□ -0.16
CLIC1-209ENST00000395892 DR1Q01658 176 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 CCNG2Q16589 344 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 HADHQ16836 314 aaKnown RBP14.06□□□□□ -0.16
CLIC1-209ENST00000395892 FAM153CQ494X1 144 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 EFHC1Q5JVL4 640 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 CCDC137Q6PK04 289 aaKnown RBP14.06□□□□□ -0.16
CLIC1-209ENST00000395892 BHLHA9Q7RTU4 235 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 HDXQ7Z353 690 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 JAMLQ86YT9 394 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 ANKLE1Q8NAG6 615 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 FAM71BQ8TC56 605 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 CAVIN3Q969G5 261 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 NT5C3BQ969T7 300 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 MYLPFQ96A32 169 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 ERP44Q9BS26 406 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 TRIM51Q9BSJ1 452 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 NEUROG2Q9H2A3 272 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 MARCH5Q9NX47 278 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 CALCOCO1Q9P1Z2 691 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 FAM153AQ9UHL3 310 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 NFU1Q9UMS0 254 aa14.06□□□□□ -0.16
CLIC1-209ENST00000395892 FNDC1Q4ZHG4 1894 aaPredicted RBP14.06□□□□□ -0.16
CLIC1-209ENST00000395892 PTPRDP23468 1912 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 ARHGEF37A1IGU5 675 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 DAPK3O43293 454 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 EFEMP2O95967 443 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 CD48P09326 243 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 IL4RP24394 825 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 OR1G1P47890 313 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 ADIGQ0VDE8 80 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 CASP8Q14790 479 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 MAP9Q49MG5 647 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 KCNT1Q5JUK3 1230 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 OTUD1Q5VV17 481 aaPredicted RBP14.05□□□□□ -0.16
CLIC1-209ENST00000395892 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.05□□□□□ -0.163e-12■■■□□ 16.7
CLIC1-209ENST00000395892 GPRIN1Q7Z2K8 1008 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 NPAS4Q8IUM7 802 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 CCDC50Q8IVM0 306 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 THEM5Q8N1Q8 247 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 IFT81Q8WYA0 676 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 RUNDC3BQ96NL0 473 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 SLC2A13Q96QE2 648 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 RHOBTB2Q9BYZ6 727 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 PPP1R12CQ9BZL4 782 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 ZCWPW1Q9H0M4 648 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 KRT82Q9NSB4 513 aa14.05□□□□□ -0.16
CLIC1-209ENST00000395892 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.05□□□□□ -0.167e-73■■□□□ 11.5
CLIC1-209ENST00000395892 COL4A4P53420 1690 aaPredicted RBP14.04□□□□□ -0.16
CLIC1-209ENST00000395892 VWA8A3KMH1 1905 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 MICAL3Q7RTP6 2002 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 GALTP07902 379 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 IVDP26440 423 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 SDC4P31431 198 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 MATKP42679 507 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 SLC11A1P49279 550 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 TKTL1P51854 596 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 DAOAP59103 153 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 ATP11AP98196 1134 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 RNASELQ05823 741 aaKnown RBP14.04□□□□□ -0.16
CLIC1-209ENST00000395892 NNTQ13423 1086 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 SNX1Q13596 522 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 CUL1Q13616 776 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 LRRC26Q2I0M4 334 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 SMTNL2Q2TAL5 461 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 BOLA3Q53S33 107 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 TFDP3Q5H9I0 405 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 PM20D1Q6GTS8 502 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 EMBQ6PCB8 327 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 DRICH1Q6PGQ1 229 aaPredicted RBP14.04□□□□□ -0.16
CLIC1-209ENST00000395892 HFE2Q6ZVN8 426 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 DEFB128Q7Z7B8 93 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 DEFB106AQ8N104 65 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 SCML4Q8N228 414 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 FAM172AQ8WUF8 416 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 TEKT4Q8WW24 435 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 ATG4AQ8WYN0 398 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLIC1-209ENST00000395892 SMARCD1Q96GM5 515 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 FAM193BQ96PV7 902 aaPredicted RBP14.04□□□□□ -0.16
CLIC1-209ENST00000395892 NPY6RQ99463 290 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 TMEM175Q9BSA9 504 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 COLEC11Q9BWP8 271 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 GPR62Q9BZJ7 368 aa14.04□□□□□ -0.16
CLIC1-209ENST00000395892 ULBP1Q9BZM6 244 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms