RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 NCOA4Q13772 614 aa20.45■□□□□ 0.86
COL11A2-204ENST00000395194 ADGRG2Q8IZP9 1017 aa20.45■□□□□ 0.86
COL11A2-204ENST00000395194 KIAA0895Q8NCT3 520 aa20.45■□□□□ 0.86
COL11A2-204ENST00000395194 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.45■□□□□ 0.86
COL11A2-204ENST00000395194 KRT82Q9NSB4 513 aa20.45■□□□□ 0.86
COL11A2-204ENST00000395194 CGNQ9P2M7 1197 aaKnown RBP20.45■□□□□ 0.86
COL11A2-204ENST00000395194 CIZ1Q9ULV3 898 aaPredicted RBP20.45■□□□□ 0.86
COL11A2-204ENST00000395194 PI4KAP42356 2102 aa20.45■□□□□ 0.86
COL11A2-204ENST00000395194 KLRC4O43908 158 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 RHOBTB1O94844 696 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 VNN1O95497 513 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 FAM163BP0C2L3 166 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 IRF1P10914 325 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 CCDC130P13994 396 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 HNRNPLP14866 589 aaKnown RBP eCLIP20.44■□□□□ 0.86
COL11A2-204ENST00000395194 BCKDHBP21953 392 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 TIE1P35590 1138 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 LIMK1P53667 647 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 SLC5A3P53794 718 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 DLG4P78352 724 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 RNF43Q68DV7 783 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 RHBDF2Q6PJF5 856 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 TMEM92Q6UXU6 159 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 PAQR9Q6ZVX9 377 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 ACOT1Q86TX2 421 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 ALLCQ8N6M5 410 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 PARD3BQ8TEW8 1205 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 SNX21Q969T3 373 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 CCSER2Q9H7U1 834 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 VPS45Q9NRW7 570 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 EXOC1Q9NV70 894 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 MMP17Q9ULZ9 603 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 ATP8B3O60423 1300 aa20.44■□□□□ 0.86
COL11A2-204ENST00000395194 SLC9A3R1O14745 358 aaPredicted RBP20.43■□□□□ 0.86
COL11A2-204ENST00000395194 COCHO43405 550 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 ACTN4O43707 911 aaKnown RBP20.43■□□□□ 0.86
COL11A2-204ENST00000395194 KRT37O76014 449 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 RTN3O95197 1032 aaPredicted RBP20.43■□□□□ 0.86
COL11A2-204ENST00000395194 KLF8O95600 359 aaPredicted RBP20.43■□□□□ 0.86
COL11A2-204ENST00000395194 CAVIN2O95810 425 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 ADH5P11766 374 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 EMC10Q5UCC4 262 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 TXNDC5Q8NBS9 432 aaKnown RBP20.43■□□□□ 0.86
COL11A2-204ENST00000395194 MDGA1Q8NFP4 955 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 CCDC26Q8TAB7 109 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 SMARCD1Q96GM5 515 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 PNKPQ96T60 521 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 EDEM2Q9BV94 578 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 DMAP1Q9NPF5 467 aaPredicted RBP20.43■□□□□ 0.86
COL11A2-204ENST00000395194 GMIPQ9P107 970 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 HMGXB4Q9UGU5 601 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 CEP192Q8TEP8 1941 aa20.43■□□□□ 0.86
COL11A2-204ENST00000395194 AP1G2O75843 785 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 KAT7O95251 611 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 ADH1CP00326 375 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 C4BPAP04003 597 aaKnown RBP20.42■□□□□ 0.86
COL11A2-204ENST00000395194 APODP05090 189 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 CRY1Q16526 586 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 KMT5BQ4FZB7 885 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 USP39Q53GS9 565 aaKnown RBP20.42■□□□□ 0.86
COL11A2-204ENST00000395194 LY6G5CQ5SRR4 150 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 HECTD3Q5T447 861 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 PMS2CLQ68D20 193 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 SPOPLQ6IQ16 392 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 DDX42Q86XP3 938 aaKnown RBP eCLIP20.42■□□□□ 0.86
COL11A2-204ENST00000395194 FUKQ8N0W3 1084 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 NAT16Q8N8M0 369 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 PDZD8Q8NEN9 1154 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 GOLGA5Q8TBA6 731 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 DDX1Q92499 740 aaKnown RBP20.42■□□□□ 0.86
COL11A2-204ENST00000395194 WBP2Q969T9 261 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 PAGE5Q96GU1 130 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 CHAMP1Q96JM3 812 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 TNIP3Q96KP6 325 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 ZFRQ96KR1 1074 aaKnown RBP20.42■□□□□ 0.86
COL11A2-204ENST00000395194 VRTNQ9H8Y1 702 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 ARHGEF4Q9NR80 690 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 FAM49BQ9NUQ9 324 aa20.42■□□□□ 0.86
COL11A2-204ENST00000395194 USP24Q9UPU5 2620 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 ASCC3Q8N3C0 2202 aaKnown RBP20.41■□□□□ 0.86
COL11A2-204ENST00000395194 A0A1B0GVL5 298 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 BCLAF3A2AJT9 711 aaKnown RBP20.41■□□□□ 0.86
COL11A2-204ENST00000395194 SGK1O00141 431 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 TM4SF5O14894 197 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 BEST1O76090 585 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 SLFN14P0C7P3 912 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 N4BP2L1Q5TBK1 243 aaPredicted RBP20.41■□□□□ 0.86
COL11A2-204ENST00000395194 RASSF3Q86WH2 238 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 BBS7Q8IWZ6 715 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 IL17RCQ8NAC3 791 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 RLN3Q8WXF3 142 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 JAKMIP2Q96AA8 810 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 CNOT6LQ96LI5 555 aaKnown RBP20.41■□□□□ 0.86
COL11A2-204ENST00000395194 SH3BP1Q9Y3L3 701 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 CEP295Q9C0D2 2601 aa20.41■□□□□ 0.86
COL11A2-204ENST00000395194 TNRC6BQ9UPQ9 1833 aaKnown RBP20.41■□□□□ 0.86
COL11A2-204ENST00000395194 PATE3B3GLJ2 98 aa20.4■□□□□ 0.86
COL11A2-204ENST00000395194 TNFRSF10BO14763 440 aa20.4■□□□□ 0.86
COL11A2-204ENST00000395194 NR3C1P04150 777 aa20.4■□□□□ 0.86
COL11A2-204ENST00000395194 DHPSP49366 369 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms