RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 HNRNPLLQ8WVV9 542 aaKnown RBP9.05□□□□□ -0.96
TDP1-203ENST00000393454 HERPUD2Q9BSE4 406 aa9.05□□□□□ -0.96
TDP1-203ENST00000393454 RAB6CQ9H0N0 254 aa9.05□□□□□ -0.96
TDP1-203ENST00000393454 TMLHEQ9NVH6 421 aa9.05□□□□□ -0.96
TDP1-203ENST00000393454 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.05□□□□□ -0.96
TDP1-203ENST00000393454 UTP11Q9Y3A2 253 aaKnown RBP9.05□□□□□ -0.96
TDP1-203ENST00000393454 MICAL3Q7RTP6 2002 aa9.05□□□□□ -0.96
TDP1-203ENST00000393454 DPYSL4O14531 572 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 HSF2BPO75031 334 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 CAPN15O75808 1086 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 TJP3O95049 919 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 OR4Q2P0C623 313 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 MYBL2P10244 700 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 RFC2P35250 354 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 PCK1P35558 622 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 SCNN1AP37088 669 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 COILP38432 576 aaPredicted RBP9.04□□□□□ -0.96
TDP1-203ENST00000393454 PBX3P40426 434 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 KCNJ1P48048 391 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 COPS2P61201 443 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 DHX34Q14147 1143 aaKnown RBP9.04□□□□□ -0.96
TDP1-203ENST00000393454 SIX1Q15475 284 aaPredicted RBP9.04□□□□□ -0.96
TDP1-203ENST00000393454 SLC39A12Q504Y0 691 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 TFDP3Q5H9I0 405 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 BEND6Q5SZJ8 279 aaPredicted RBP9.04□□□□□ -0.96
TDP1-203ENST00000393454 FAM117BQ6P1L5 589 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 C4orf50Q6ZRC1 276 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 ANKS1BQ7Z6G8 1248 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 DEFB106AQ8N104 65 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 LRRC43Q8N309 656 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 CASKIN2Q8WXE0 1202 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 ATG4AQ8WYN0 398 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 RUNDC3BQ96NL0 473 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 TRIM51Q9BSJ1 452 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 ULBP1Q9BZM6 244 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 TRIM31Q9BZY9 425 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 GDF3Q9NR23 364 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.04□□□□□ -0.96
TDP1-203ENST00000393454 RASAL2Q9UJF2 1139 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 NFU1Q9UMS0 254 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 SYN3O14994 580 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 FBXO21O94952 628 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 USP17L7P0C7H9 530 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 HSPA1AP0DMV8 641 aaKnown RBP9.04□□□□□ -0.96
TDP1-203ENST00000393454 HSPA1BP0DMV9 641 aaKnown RBP9.04□□□□□ -0.96
TDP1-203ENST00000393454 RAG1P15918 1043 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 KDELR1P24390 212 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 GRIK1P39086 918 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 CARSP49589 748 aaKnown RBP9.04□□□□□ -0.96
TDP1-203ENST00000393454 SULT1E1P49888 294 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 ARPP19P56211 112 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 YWHAZP63104 245 aaKnown RBP9.04□□□□□ -0.96
TDP1-203ENST00000393454 ADCY1Q08828 1119 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 HLTFQ14527 1009 aaKnown RBP eCLIP9.04□□□□□ -0.96
TDP1-203ENST00000393454 KRT81Q14533 505 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 TRADDQ15628 312 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 CTXN3Q4LDR2 81 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 DCAF6Q58WW2 860 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 VARS2Q5ST30 1063 aaKnown RBP9.04□□□□□ -0.96
TDP1-203ENST00000393454 SPOUT1Q5T280 376 aaKnown RBP9.04□□□□□ -0.96
TDP1-203ENST00000393454 TTC27Q6P3X3 843 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 GPRIN1Q7Z2K8 1008 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 DCP1BQ8IZD4 617 aaKnown RBP9.04□□□□□ -0.96
TDP1-203ENST00000393454 ZMIZ2Q8NF64 920 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 B3GALT6Q96L58 329 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 GDAP1L1Q96MZ0 367 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 PEBP4Q96S96 227 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 NCAPGQ9BPX3 1015 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 FAM118BQ9BPY3 351 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 TMEM175Q9BSA9 504 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 CALN1Q9BXU9 219 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 RAB17Q9H0T7 212 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 DPH5Q9H2P9 285 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 DMAP1Q9NPF5 467 aaPredicted RBP9.04□□□□□ -0.96
TDP1-203ENST00000393454 CHST7Q9NS84 486 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 TMEM30AQ9NV96 361 aa9.04□□□□□ -0.96
TDP1-203ENST00000393454 SF3B1O75533 1304 aaKnown RBP eCLIP9.03□□□□□ -0.964e-7■■■■■ 133.7
TDP1-203ENST00000393454 FNDC1Q4ZHG4 1894 aaPredicted RBP9.03□□□□□ -0.96
TDP1-203ENST00000393454 hCG_1818297A0A087WSY0 165 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 SYNJ2BP-COX16A0A087WUM0 186 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 CAPN9O14815 690 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 DAPK3O43293 454 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 DAB1O75553 588 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 OAZ2O95190 189 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 TIMP1P01033 207 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 GALTP07902 379 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 TFE3P19532 575 aaPredicted RBP9.03□□□□□ -0.96
TDP1-203ENST00000393454 CYP2F1P24903 491 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 MATKP42679 507 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 CDKN2BP42772 138 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 PTPN9P43378 593 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 FNTAP49354 379 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 CDH6P55285 790 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 DYNLT1P63172 113 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 IFRD2Q12894 506 aaPredicted RBP9.03□□□□□ -0.96
TDP1-203ENST00000393454 PPP1R7Q15435 360 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 CYP1B1Q16678 543 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 BOLA3Q53S33 107 aa9.03□□□□□ -0.96
TDP1-203ENST00000393454 FUT10Q6P4F1 479 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms