RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 PSMD4P55036 377 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 BPIFB4P59827 614 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ABCE1P61221 599 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 ELF3P78545 371 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 TFAMQ00059 246 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 CD83Q01151 205 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PPIL2Q13356 520 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 SYT16Q17RD7 645 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 TYSND1Q2T9J0 566 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ARL6IP4Q66PJ3 421 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 RAB12Q6IQ22 244 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PHTF2Q8N3S3 785 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 MRPL50Q8N5N7 158 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 POU5F2Q8N7G0 328 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PJA1Q8NG27 643 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 OR6Y1Q8NGX8 325 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PCDH19Q8TAB3 1148 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 AGAP11Q8TF27 550 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ANKS1AQ92625 1134 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 TADA1Q96BN2 335 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 APOL2Q9BQE5 337 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PI4K2AQ9BTU6 479 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 FOXP1Q9H334 677 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 ACAD9Q9H845 621 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 MEAF6Q9HAF1 191 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ARHGEF10LQ9HCE6 1279 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 SETD4Q9NVD3 440 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 RTEL1Q9NZ71 1219 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 GRHL1Q9NZI5 618 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 RSL24D1Q9UHA3 163 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 SHOC2Q9UQ13 582 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 KANSL1LA0AUZ9 987 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 SAGE2PA6NJ88 616 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 LOC110117498-PIK3R3F6TDL0 507 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PODXLO00592 558 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ENSAO43768 121 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 RBMXL2O75526 392 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 KLHL2O95198 593 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 MAP3K6O95382 1288 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 CBX6O95503 412 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 VCLP18206 1134 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 MSH3P20585 1137 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 OGNP20774 298 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 BGNP21810 368 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PTPREP23469 700 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PRKCHP24723 683 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ALDH4A1P30038 563 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 MAGEA3P43357 314 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 NPTX2P47972 431 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 MRPS5P82675 430 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.37□□□□□ -1.87
PHF3-202ENST00000393387 TCP10Q12799 353 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 NR1H3Q13133 447 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 USP10Q14694 798 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 PDK3Q15120 406 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PCSK7Q16549 785 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 KCTD19Q17RG1 926 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 LIN54Q6MZP7 749 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PTAR1Q7Z6K3 402 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 ARHGEF19Q8IW93 802 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ZZZ3Q8IYH5 903 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 OR7A2PQ8NGA2 310 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 DDX1Q92499 740 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 ANKRD7Q92527 254 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ACSF2Q96CM8 615 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 PGBD4Q96DM1 585 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 EDC3Q96F86 508 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 GMCL1Q96IK5 515 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 L3MBTL3Q96JM7 780 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 COX4I2Q96KJ9 171 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 FERD3LQ96RJ6 166 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 WRNIP1Q96S55 665 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 CYP39A1Q9NYL5 469 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ARMCX1Q9P291 453 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ARHGAP28Q9P2N2 729 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 SEPT9Q9UHD8 586 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 VPS4AQ9UN37 437 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 LYVE1Q9Y5Y7 322 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 FAM47DPA6NHR8 397 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PSMD9O00233 223 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 TOR1BO14657 336 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 MID1O15344 667 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 NPPAP01160 153 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PGK2P07205 417 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 FESP07332 822 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PTPN7P35236 360 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 GLRBP48167 497 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 CLK2P49760 499 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 ALDH5A1P51649 535 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 MLLT6P55198 1093 aaPredicted RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 RAB2AP61019 212 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PSME3P61289 254 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 PTH1RQ03431 593 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 SLC5A9Q2M3M2 681 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 LRRC24Q50LG9 513 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 ARHGAP15Q53QZ3 475 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 KCNT1Q5JUK3 1230 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 DUS1LQ6P1R4 473 aaKnown RBP3.37□□□□□ -1.87
PHF3-202ENST00000393387 WDR93Q6P2C0 686 aa3.37□□□□□ -1.87
PHF3-202ENST00000393387 SYCE2Q6PIF2 218 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms