RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 SASS6Q6UVJ0 657 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 PIGZQ86VD9 579 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 CCDC105Q8IYK2 499 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 RBBP8NLQ8NC74 664 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 PJA1Q8NG27 643 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 CSGALNACT1Q8TDX6 532 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 NDRG1Q92597 394 aaKnown RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 DNASE1L2Q92874 299 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 IRF7Q92985 503 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 WBP2Q969T9 261 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 E2F7Q96AV8 911 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 CEP295NLQ96MC4 621 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 SLITRK1Q96PX8 696 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 DUSP16Q9BY84 665 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 NMUR1Q9HB89 426 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 UBE2TQ9NPD8 197 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 HPS4Q9NQG7 708 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 GKN1Q9NS71 199 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 FAM86C1Q9NVL1 165 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 IL37Q9NZH6 218 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 KMT2EQ8IZD2 1858 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 MYO10Q9HD67 2058 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 OBSL1O75147 1896 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 A0A1W2PQH9 124 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 KANSL1LA0AUZ9 987 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 FAM170AA1A519 330 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 FAM92AA1XBS5 289 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 FAM170BA6NMN3 283 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 SPECC1L-ADORA2AF8WAN1 911 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 H0Y858 1186 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 M0QYV0 167 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 LEFTY2O00292 366 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 O00370 1275 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 OLFM2O95897 454 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 ZDHHC11BP0C7U3 371 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 TRIM21P19474 475 aaKnown RBP8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 PON1P27169 355 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 WEE1P30291 646 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 RGS7P49802 495 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 KLK7P49862 253 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 CLCN5P51795 746 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 KPNA1P52294 538 aaPredicted RBP8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 KIF11P52732 1056 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 ZNF132P52740 706 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 YWHAEP62258 255 aaKnown RBP8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 GCNT1Q02742 428 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 PRKCQQ04759 706 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 TYRO3Q06418 890 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 PDE4CQ08493 712 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 TCF15Q12870 199 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 EXOC3L4Q17RC7 722 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 VWA3BQ502W6 1294 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 ARHGAP29Q52LW3 1261 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 SGO2Q562F6 1265 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 TCP11X2Q5H9J9 407 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 GBP6Q6ZN66 633 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 SCD5Q86SK9 330 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 FAM114A1Q8IWE2 563 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 TTC39CQ8N584 583 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 ANKRD52Q8NB46 1076 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 ENOX1Q8TC92 643 aaKnown RBP8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 CHFRQ96EP1 664 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 FAXDC2Q96IV6 333 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 ZFRQ96KR1 1074 aaKnown RBP8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 FAM83CQ9BQN1 747 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 TUBGCP2Q9BSJ2 902 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 DDX23Q9BUQ8 820 aaKnown RBP8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 LINC00597Q9H2U6 94 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 NDST4Q9H3R1 872 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 KIF9Q9HAQ2 790 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 LTB4R2Q9NPC1 389 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 SIX2Q9NPC8 291 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 RBM12Q9NTZ6 932 aaKnown RBP8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 FANCLQ9NW38 375 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 OBP2AQ9NY56 170 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 EHD2Q9NZN4 543 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 CFAP97Q9P2B7 532 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 APEX2Q9UBZ4 518 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 ARHGAP26Q9UNA1 814 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 SIT1Q9Y3P8 196 aa8.09□□□□□ -1.11
HMGB3P1-201ENST00000393368 NUP210Q8TEM1 1887 aaPredicted RBP8.09□□□□□ -1.12
HMGB3P1-201ENST00000393368 TICRRQ7Z2Z1 1910 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 BECN2A8MW95 431 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 TLR5O60602 858 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 VDRP11473 427 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 RARGP13631 454 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 LCP1P13796 627 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 CTHP32929 405 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 USP8P40818 1118 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 IFNAR2P48551 515 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 TKTL1P51854 596 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 BCAT1P54687 386 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 SLC7A9P82251 487 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 ADIGQ0VDE8 80 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 KCNMA1Q12791 1236 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 RUNX3Q13761 415 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZNF268Q14587 947 aaPredicted RBP8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 PON2Q15165 354 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 KRT31Q15323 416 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 ANO6Q4KMQ2 910 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms