RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 hCG_1818297A0A087WSY0 165 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 TBC1D12O60347 775 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 FGFR3P22607 806 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 SOX11P35716 441 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 SERPINB5P36952 375 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 GPC3P51654 580 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 ACTR3P61158 418 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 MRPS22P82650 360 aaKnown RBP17.03■□□□□ 0.32
PHTF1-205ENST00000393357 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 ZNF513Q8N8E2 541 aaPredicted RBP17.03■□□□□ 0.32
PHTF1-205ENST00000393357 ICA1LQ8NDH6 482 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 MARK4Q96L34 752 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 C8orf37Q96NL8 207 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 RAVER2Q9HCJ3 691 aaKnown RBP17.03■□□□□ 0.32
PHTF1-205ENST00000393357 ATXN10Q9UBB4 475 aa17.03■□□□□ 0.32
PHTF1-205ENST00000393357 SPATA31A5Q5VU36 1347 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 SPATA31A7Q8IWB4 1347 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 C15orf38-AP3S2A0A0A6YYH1 394 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 RAP1GAPP47736 663 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 NRF1Q16656 503 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 TMEM132AQ24JP5 1023 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 TMEM179Q6ZVK1 233 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 ARPINQ7Z6K5 226 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 NME8Q8N427 588 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 TMEM161BQ8NDZ6 487 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 CLMNQ96JQ2 1002 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 GABBR1Q9UBS5 961 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 ZC3H7BQ9UGR2 993 aaKnown RBP17.02■□□□□ 0.32
PHTF1-205ENST00000393357 IP6K2Q9UHH9 426 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 FIS1Q9Y3D6 152 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 A0A0B4J269 797 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 STAM2O75886 525 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 STAMBPO95630 424 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 CLPTM1O96005 669 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 STX3Q13277 289 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 TRMT5Q32P41 509 aaKnown RBP17.02■□□□□ 0.32
PHTF1-205ENST00000393357 Q3C1V9 767 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 C6orf52Q5T4I8 152 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 TATDN1Q6P1N9 297 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 ABRAQ8N0Z2 381 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 GPD1LQ8N335 351 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.02■□□□□ 0.32
PHTF1-205ENST00000393357 ZSCAN18Q8TBC5 510 aaPredicted RBP17.02■□□□□ 0.32
PHTF1-205ENST00000393357 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.02■□□□□ 0.32
PHTF1-205ENST00000393357 WWP1Q9H0M0 922 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 RNPEPQ9H4A4 650 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 NYAP2Q9P242 653 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 STRCQ7RTU9 1775 aa17.02■□□□□ 0.32
PHTF1-205ENST00000393357 CNTNAP2Q9UHC6 1331 aa17.02■□□□□ 0.31
PHTF1-205ENST00000393357 KCNN4O15554 427 aa17.02■□□□□ 0.31
PHTF1-205ENST00000393357 RPL10P27635 214 aaKnown RBP17.02■□□□□ 0.31
PHTF1-205ENST00000393357 GRIA1P42261 906 aa17.02■□□□□ 0.31
PHTF1-205ENST00000393357 GTF2A2P52657 109 aa17.02■□□□□ 0.31
PHTF1-205ENST00000393357 CNGA3Q16281 694 aa17.02■□□□□ 0.31
PHTF1-205ENST00000393357 MIPOL1Q8TD10 442 aa17.02■□□□□ 0.31
PHTF1-205ENST00000393357 TARS2Q9BW92 718 aaKnown RBP17.02■□□□□ 0.31
PHTF1-205ENST00000393357 SEMA6AQ9H2E6 1030 aa17.02■□□□□ 0.31
PHTF1-205ENST00000393357 S100A14Q9HCY8 104 aa17.02■□□□□ 0.31
PHTF1-205ENST00000393357 ZNF358Q9NW07 568 aa17.02■□□□□ 0.31
PHTF1-205ENST00000393357 SCN7AQ01118 1682 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 TM9SF1O15321 606 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 CST3P01034 146 aaPredicted RBP17.01■□□□□ 0.31
PHTF1-205ENST00000393357 ITGA2BP08514 1039 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 MAPK10P53779 464 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 MSLNQ13421 630 aaPredicted RBP17.01■□□□□ 0.31
PHTF1-205ENST00000393357 PDE1CQ14123 709 aaPredicted RBP17.01■□□□□ 0.31
PHTF1-205ENST00000393357 SWSAP1Q6NVH7 229 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 FAM163AQ96GL9 167 aaPredicted RBP17.01■□□□□ 0.31
PHTF1-205ENST00000393357 MXRA8Q9BRK3 442 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 TUBB6Q9BUF5 446 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 DOLKQ9UPQ8 538 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 EXOC7Q9UPT5 735 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 NHSL1Q5SYE7 1610 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 TFPTP0C1Z6 253 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 CUL2Q13617 745 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 MRPL1Q9BYD6 325 aaKnown RBP17.01■□□□□ 0.31
PHTF1-205ENST00000393357 COPS7BQ9H9Q2 264 aaPredicted RBP17.01■□□□□ 0.31
PHTF1-205ENST00000393357 ZNRF3Q9ULT6 936 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 SHOC2Q9UQ13 582 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 ARFGEF1Q9Y6D6 1849 aa17.01■□□□□ 0.31
PHTF1-205ENST00000393357 A0A088AWK7 358 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 P4HA2O15460 535 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 PCSK6P29122 969 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 CDKN2BP42772 138 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 NADK2Q4G0N4 442 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 TRIM67Q6ZTA4 783 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 PHTF2Q8N3S3 785 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 KLHL23Q8NBE8 558 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 TAAR1Q96RJ0 339 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 PPP1R16BQ96T49 567 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 DCUN1D5Q9BTE7 237 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 FAM192AQ9GZU8 254 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 PCDH9Q9HC56 1237 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 ARHGEF38Q9NXL2 777 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 RBAKQ9NYW8 714 aaPredicted RBP17■□□□□ 0.31
PHTF1-205ENST00000393357 SOX13Q9UN79 622 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 APOBEC2Q9Y235 224 aaKnown RBP17■□□□□ 0.31
PHTF1-205ENST00000393357 RPS6KL1Q9Y6S9 549 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 NAV1Q8NEY1 1877 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 A8MXQ7 604 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms