RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 DVL2O14641 736 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 SHOXO15266 292 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 TMIGD3P0DMS9 266 aaPredicted RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 ARF4P18085 180 aaPredicted RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.75□□□□□ -1.81
XRN1-202ENST00000392981 TFCP2Q12800 502 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 KARSQ15046 597 aaKnown RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 NTRK2Q16620 822 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.75□□□□□ -1.81
XRN1-202ENST00000392981 KIF4BQ2VIQ3 1234 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 ZBTB41Q5SVQ8 909 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 TSSK4Q6SA08 328 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 PPP1R3BQ86XI6 285 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 CCDC28AQ8IWP9 274 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 SPARTQ8N0X7 666 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 IQUBQ8NA54 791 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 ZNF540Q8NDQ6 660 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 OTUD7AQ8TE49 926 aaPredicted RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 MOAP1Q96BY2 351 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 TSPYL1Q9H0U9 437 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 AJAP1Q9UKB5 411 aaPredicted RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 RAB21Q9UL25 225 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 ATAD2BQ9ULI0 1458 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 FAM47DPA6NHR8 397 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 AGAP5A6NIR3 686 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 EFCAB8A8MWE9 144 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 ZNF185O15231 689 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 PSMC2P35998 433 aaKnown RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 FIGNQ5HY92 759 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 PLEKHM3Q6ZWE6 761 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 KCTD1Q719H9 257 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 CHST3Q7LGC8 479 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 PPP1R42Q7Z4L9 355 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 PALM2Q8IXS6 379 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 IPMKQ8NFU5 416 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 GIMAP7Q8NHV1 300 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 RBM18Q96H35 190 aaKnown RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 PUS3Q9BZE2 481 aaKnown RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 RNF32Q9H0A6 362 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 SLC25A32Q9H2D1 315 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 COL20A1Q9P218 1284 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 ARPP21Q9UBL0 812 aaPredicted RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 NENFQ9UMX5 172 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 STX8Q9UNK0 236 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 C2CD2Q9Y426 696 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 ABCA5Q8WWZ7 1642 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 LRRD1A4D1F6 860 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 TMCO5BA8MYB1 307 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 SLC25A17O43808 307 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 PRICKLE3O43900 615 aaPredicted RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 KCNK5O95279 499 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 MMP2P08253 660 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 POTEIP0CG38 1075 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 EZRP15311 586 aaKnown RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 SELPP16109 830 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 DDCP20711 480 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 PTDSS1P48651 473 aaKnown RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 MECP2P51608 486 aaKnown RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 PREPLQ4J6C6 727 aaPredicted RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 LDLRAP1Q5SW96 308 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 SLC30A10Q6XR72 485 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 GPR161Q8N6U8 529 aaKnown RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 FAM46DQ8NEK8 389 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 SHCBP1Q8NEM2 672 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 BRSK1Q8TDC3 778 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 CDCA5Q96FF9 252 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 UROC1Q96N76 676 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 NELFAQ9H3P2 528 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 BRF2Q9HAW0 419 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.75□□□□□ -1.81
XRN1-202ENST00000392981 NDUFA13Q9P0J0 144 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 NAGPAQ9UK23 515 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 ATXN7L1Q9ULK2 861 aaPredicted RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 ACEP12821 1306 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 POTEB3A0JP26 581 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 PRPSAP2O60256 369 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 PSMD10O75832 226 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 TPPPO94811 219 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 RHOXF2BP0C7M4 288 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 CSF2RBP32927 897 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 TTKP33981 857 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 HAND2P61296 217 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 LRRC74AQ0VAA2 488 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 UGP2Q16851 508 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 C9orf152Q5JTZ5 239 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 C10orf76Q5T2E6 689 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 POTEBQ6S5H4 581 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 CLEC9AQ6UXN8 241 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 MARK2Q7KZI7 788 aaKnown RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 OTUD6AQ7L8S5 288 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 DPP10Q8N608 796 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 ZMIZ2Q8NF64 920 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 NPLOC4Q8TAT6 608 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 RAPGEF5Q92565 580 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 KTI12Q96EK9 354 aaPredicted RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 FAM167AQ96KS9 214 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 TCEANC2Q96MN5 208 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 RHOXF2Q9BQY4 288 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 REEP2Q9BRK0 252 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms