RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 GDAP2Q9NXN4 497 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 IPPQ9Y573 584 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 BANF1O75531 89 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 BRAFP15056 766 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 GCAP28676 217 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 ZNF157P51786 506 aaPredicted RBP26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 LRRC14Q15048 493 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 BOLA3Q53S33 107 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 ZC3H12AQ5D1E8 599 aaKnown RBP26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 FAM47CQ5HY64 1035 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 ZDHHC17Q8IUH5 632 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 CCDC13Q8IYE1 715 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 CACNA2D3Q8IZS8 1091 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 RIBC1Q8N443 379 aaPredicted RBP26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 KATNAL1Q9BW62 490 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 VPS37BQ9H9H4 285 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 KCNK9Q9NPC2 374 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 Q9Y3F1 56 aa26.74■■□□□ 1.87
SMARCD3-203ENST00000392811 XPOTO43592 962 aaKnown RBP26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 IL4RP24394 825 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 RGS2P41220 211 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 ROR1Q01973 937 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 BST2Q10589 180 aaKnown RBP26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 PDK2Q15119 407 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 C17orf99Q6UX52 265 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 CAPN12Q6ZSI9 719 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 MAP7D3Q8IWC1 876 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 LRRC34Q8IZ02 419 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 OTUD6BQ8N6M0 293 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 ANKRD52Q8NB46 1076 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 ARRDC4Q8NCT1 418 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 SMG8Q8ND04 991 aaKnown RBP26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 TEKT4Q8WW24 435 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 P3H4Q92791 437 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 SNX25Q9H3E2 840 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 MANSC4A6NHS7 340 aaPredicted RBP26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 PNPLA4P41247 253 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 TAF6P49848 677 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 NRLP54845 237 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 MPP2Q14168 576 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 TMED2Q15363 201 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 FSCN1Q16658 493 aaKnown RBP26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 FNBP1LQ5T0N5 605 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 DARS2Q6PI48 645 aaKnown RBP26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 ZC3H18Q86VM9 953 aaKnown RBP26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 ANKMY2Q8IV38 441 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 SRRM1Q8IYB3 904 aaKnown RBP26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 CLEC4CQ8WTT0 213 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 MAML1Q92585 1016 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 RASSF4Q9H2L5 321 aa26.73■■□□□ 1.87
SMARCD3-203ENST00000392811 TCRBV7S3A2A0A539 114 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 RDXP35241 583 aaKnown RBP26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 BCAT1P54687 386 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 C1orf228Q6PIY5 440 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 ANKRD42Q8N9B4 389 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 APPL2Q8NEU8 664 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 TSPAN18Q96SJ8 248 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 SNRNP25Q9BV90 132 aaKnown RBP26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 PCDH18Q9HCL0 1135 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 TFE3P19532 575 aaPredicted RBP26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 HOXC8P31273 242 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 HDAC4P56524 1084 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 ARL4CP56559 192 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 PURAQ00577 322 aaKnown RBP26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 CA9Q16790 459 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 MSS51Q4VC12 460 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 LIMS2Q7Z4I7 341 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 NME8Q8N427 588 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 CABS1Q96KC9 395 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 TBCBQ99426 244 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 APBA2Q99767 749 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 PHACTR1Q9C0D0 580 aa26.72■■□□□ 1.87
SMARCD3-203ENST00000392811 PCNTO95613 3336 aa26.71■■□□□ 1.87
SMARCD3-203ENST00000392811 TMEM63AO94886 807 aa26.71■■□□□ 1.87
SMARCD3-203ENST00000392811 IGHA2P01877 340 aa26.71■■□□□ 1.87
SMARCD3-203ENST00000392811 SV2CQ496J9 727 aa26.71■■□□□ 1.87
SMARCD3-203ENST00000392811 RNF187Q5TA31 235 aaPredicted RBP26.71■■□□□ 1.87
SMARCD3-203ENST00000392811 TADA2BQ86TJ2 420 aa26.71■■□□□ 1.87
SMARCD3-203ENST00000392811 TDRPQ86YL5 185 aa26.71■■□□□ 1.87
SMARCD3-203ENST00000392811 PQLC3Q8N755 202 aa26.71■■□□□ 1.87
SMARCD3-203ENST00000392811 PLD5Q8N7P1 536 aa26.71■■□□□ 1.87
SMARCD3-203ENST00000392811 DYDC1Q8WWB3 177 aa26.71■■□□□ 1.87
SMARCD3-203ENST00000392811 ACTL7BQ9Y614 415 aa26.71■■□□□ 1.87
SMARCD3-203ENST00000392811 POC1B-GALNT4F8VUJ3 575 aa26.7■■□□□ 1.87
SMARCD3-203ENST00000392811 VIMP08670 466 aaKnown RBP26.7■■□□□ 1.87
SMARCD3-203ENST00000392811 GNAT1P11488 350 aa26.7■■□□□ 1.87
SMARCD3-203ENST00000392811 DESP17661 470 aa26.7■■□□□ 1.87
SMARCD3-203ENST00000392811 STIP1P31948 543 aaKnown RBP26.7■■□□□ 1.87
SMARCD3-203ENST00000392811 LIG3P49916 1009 aa26.7■■□□□ 1.87
SMARCD3-203ENST00000392811 GPX6P59796 221 aa26.7■■□□□ 1.87
SMARCD3-203ENST00000392811 ANKRD20A8PQ5CZ79 823 aa26.7■■□□□ 1.87
SMARCD3-203ENST00000392811 DCAF8L1A6NGE4 600 aa26.7■■□□□ 1.86
SMARCD3-203ENST00000392811 RASA4BC9J798 803 aa26.7■■□□□ 1.86
SMARCD3-203ENST00000392811 H7C0C1 242 aa26.7■■□□□ 1.86
SMARCD3-203ENST00000392811 RASA4O43374 803 aa26.7■■□□□ 1.86
SMARCD3-203ENST00000392811 LCP1P13796 627 aa26.7■■□□□ 1.86
SMARCD3-203ENST00000392811 ATP5OP48047 213 aa26.7■■□□□ 1.86
SMARCD3-203ENST00000392811 RPL34P49207 117 aaKnown RBP26.7■■□□□ 1.86
SMARCD3-203ENST00000392811 BASP1P80723 227 aaKnown RBP26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms