RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 GSTM1P09488 218 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 VDRP11473 427 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PAICSP22234 425 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 CHKAP35790 457 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 BCAT1P54687 386 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ZNF543Q08ER8 600 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 STX4Q12846 297 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 TRIM32Q13049 653 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CAMK1Q14012 370 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 FNDC3BQ53EP0 1204 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 CCDC92Q53HC0 331 aaPredicted RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 TMEM164Q5U3C3 297 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CDC73Q6P1J9 531 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 DENND1BQ6P3S1 775 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 IYDQ6PHW0 289 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 KRT74Q7RTS7 529 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 KDELC2Q7Z4H8 507 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 EXOC3L1Q86VI1 746 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 KSR1Q8IVT5 923 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 WDR36Q8NI36 951 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 LENG9Q96B70 501 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 THAP11Q96EK4 314 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ZNF668Q96K58 619 aaPredicted RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 AGPAT1Q99943 283 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CEP44Q9C0F1 390 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 KCNN2Q9H2S1 579 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 KLHL31Q9H511 634 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 XPNPEP3Q9NQH7 507 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 LRRC4BQ9NT99 713 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PCMTD2Q9NV79 361 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 SPG21Q9NZD8 308 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 TRPC4Q9UBN4 977 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 UBA2Q9UBT2 640 aaPredicted RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 MRPS23Q9Y3D9 190 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 SHANK2Q9UPX8 1470 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 SLCO1B7G3V0H7 640 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ASGR1P07306 291 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ITIH2P19823 946 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CHRNA5P30532 468 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 RGS7P49802 495 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 RAD23AP54725 363 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ITGA1P56199 1179 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PTPN12Q05209 780 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 SF3B3Q15393 1217 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 AAK1Q2M2I8 961 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 SGO1Q5FBB7 561 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PRR5LQ6MZQ0 368 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 GALNT18Q6P9A2 607 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 RGS9BPQ6ZS82 235 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 TRPM8Q7Z2W7 1104 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 VN1R5Q7Z5H4 357 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 NECAB2Q7Z6G3 386 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 DEFB128Q7Z7B8 93 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 KRT73Q86Y46 540 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 MIB1Q86YT6 1006 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CENPSQ8N2Z9 138 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 SLC25A41Q8N5S1 370 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 RFWD2Q8NHY2 731 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ATL1Q8WXF7 558 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ABTB1Q969K4 478 aaPredicted RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 CLMNQ96JQ2 1002 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 MXRA8Q9BRK3 442 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 C2orf49Q9BVC5 232 aaPredicted RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 ACTR8Q9H981 624 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 VTA1Q9NP79 307 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 TBC1D13Q9NVG8 400 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 HSPBP1Q9NZL4 362 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 DBR1Q9UK59 544 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 SIK3Q9Y2K2 1263 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ARIH1Q9Y4X5 557 aaPredicted RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 RAPGEF6Q8TEU7 1601 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CPSF1Q10570 1443 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 RFX7Q2KHR2 1363 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CFAP73A6NFT4 308 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 B2RBV5 119 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 RNF103O00237 685 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 POLRMTO00411 1230 aaKnown RBP4.11□□□□□ -1.75
UBR3-202ENST00000392632 KPNA3O00505 521 aaPredicted RBP4.11□□□□□ -1.75
UBR3-202ENST00000392632 CA12O43570 354 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 ANXA5P08758 320 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 FGFR1P11362 822 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 CHRNB3Q05901 458 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 TMED1Q13445 227 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 PDK2Q15119 407 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 KIAA1324Q6UXG2 1013 aaKnown RBP4.11□□□□□ -1.75
UBR3-202ENST00000392632 C11orf57Q6ZUT1 292 aaPredicted RBP4.11□□□□□ -1.75
UBR3-202ENST00000392632 FAM20CQ8IXL6 584 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 NUP93Q8N1F7 819 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 RIBC1Q8N443 379 aaPredicted RBP4.11□□□□□ -1.75
UBR3-202ENST00000392632 TMEM143Q96AN5 459 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 TMA16Q96EY4 203 aaKnown RBP4.11□□□□□ -1.75
UBR3-202ENST00000392632 THUMPD3Q9BV44 507 aaKnown RBP4.11□□□□□ -1.75
UBR3-202ENST00000392632 FAIM2Q9BWQ8 316 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 AP1M1Q9BXS5 423 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 SEZ6LQ9BYH1 1024 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 PUS7LQ9H0K6 701 aaKnown RBP4.11□□□□□ -1.75
UBR3-202ENST00000392632 TMEM8AQ9HCN3 771 aa4.11□□□□□ -1.75
UBR3-202ENST00000392632 RRAGDQ9NQL2 400 aaPredicted RBP4.11□□□□□ -1.75
UBR3-202ENST00000392632 PIH1D3Q9NQM4 214 aaKnown RBP4.11□□□□□ -1.75
UBR3-202ENST00000392632 AVENQ9NQS1 362 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms