RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 SH3RF2Q8TEC5 729 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 CNOT6LQ96LI5 555 aaKnown RBP12.51□□□□□ -0.41
RFC4-202ENST00000392481 RNF38Q9H0F5 515 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 THAP9Q9H5L6 903 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 CHORDC1Q9UHD1 332 aaPredicted RBP12.51□□□□□ -0.41
RFC4-202ENST00000392481 KIAA1257Q9ULG3 409 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 PATJQ8NI35 1801 aa12.51□□□□□ -0.41
RFC4-202ENST00000392481 HELZP42694 1942 aaKnown RBP12.5□□□□□ -0.41
RFC4-202ENST00000392481 SPECC1L-ADORA2AF8WAN1 911 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 CTHP32929 405 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 GCNT1Q02742 428 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 FZD5Q13467 585 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 RUNX3Q13761 415 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 TPD52L1Q16890 204 aaPredicted RBP12.5□□□□□ -0.41
RFC4-202ENST00000392481 RBM43Q6ZSC3 357 aaKnown RBP12.5□□□□□ -0.41
RFC4-202ENST00000392481 GPRIN1Q7Z2K8 1008 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 ANKRD52Q8NB46 1076 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 OSCP1Q8WVF1 389 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 UBXN6Q9BZV1 441 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 INTS2Q9H0H0 1204 aaKnown RBP12.5□□□□□ -0.41
RFC4-202ENST00000392481 EBF3Q9H4W6 596 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 HPS4Q9NQG7 708 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 TLR8Q9NR97 1041 aaKnown RBP12.5□□□□□ -0.41
RFC4-202ENST00000392481 GMIPQ9P107 970 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 NDRG2Q9UN36 371 aaKnown RBP12.5□□□□□ -0.41
RFC4-202ENST00000392481 SCML2Q9UQR0 700 aa12.5□□□□□ -0.41
RFC4-202ENST00000392481 H0Y858 1186 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 LEFTY2O00292 366 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 COCHO43405 550 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 PAEPP09466 180 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 VDRP11473 427 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 ACO1P21399 889 aaKnown RBP12.49□□□□□ -0.41
RFC4-202ENST00000392481 SOX9P48436 509 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 IFNAR2P48551 515 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 KIF11P52732 1056 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 SLC8A3P57103 927 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 ZXDBP98169 803 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 ANGPT1Q15389 498 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 SGO2Q562F6 1265 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 TRIM68Q6AZZ1 485 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 TMEM270Q6UE05 265 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 DDX42Q86XP3 938 aaKnown RBP eCLIP12.49□□□□□ -0.41
RFC4-202ENST00000392481 CREBRFQ8IUR6 639 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 C1orf210Q8IVY1 113 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 FAM114A1Q8IWE2 563 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 TTC16Q8NEE8 873 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 TTC8Q8TAM2 541 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 ATP2A3Q93084 1043 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 JAKMIP2Q96AA8 810 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 DUS2Q9NX74 493 aaKnown RBP12.49□□□□□ -0.41
RFC4-202ENST00000392481 CPQQ9Y646 472 aa12.49□□□□□ -0.41
RFC4-202ENST00000392481 OTOL1A6NHN0 477 aaPredicted RBP12.48□□□□□ -0.41
RFC4-202ENST00000392481 MBD3O95983 291 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 MBL2P11226 248 aaPredicted RBP12.48□□□□□ -0.41
RFC4-202ENST00000392481 ARSAP15289 507 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 CD19P15391 556 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 MTIF2P46199 727 aaKnown RBP12.48□□□□□ -0.41
RFC4-202ENST00000392481 AMPD2Q01433 879 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 EML3Q32P44 896 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 TXNDC11Q6PKC3 985 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 RRAGAQ7L523 313 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 CCDC186Q7Z3E2 898 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 ARHGEF19Q8IW93 802 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 CPA6Q8N4T0 437 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 ATOH1Q92858 354 aaPredicted RBP12.48□□□□□ -0.41
RFC4-202ENST00000392481 KAT5Q92993 513 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 CCSER2Q9H7U1 834 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 SMPD4Q9NXE4 827 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 HESX1Q9UBX0 185 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 PCDHB4Q9Y5E5 795 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 WNT6Q9Y6F9 365 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 USP3Q9Y6I4 520 aa12.48□□□□□ -0.41
RFC4-202ENST00000392481 GTPBP10A4D1E9 387 aaKnown RBP12.47□□□□□ -0.41
RFC4-202ENST00000392481 O00370 1275 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 SLC9A3R1O14745 358 aaPredicted RBP12.47□□□□□ -0.41
RFC4-202ENST00000392481 CYP26A1O43174 497 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 TLR5O60602 858 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 CHRNB1P11230 501 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 PGFP49763 221 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 PSEN1P49768 467 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 ZNF132P52740 706 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 BCAT1P54687 386 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 LRRC32Q14392 662 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 MAN2A1Q16706 1144 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 GOLGA7BQ2TAP0 167 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 RAB41Q5JT25 222 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 LCLAT1Q6UWP7 414 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 MAMSTRQ6ZN01 415 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 GBP6Q6ZN66 633 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 PIGZQ86VD9 579 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 TTC30AQ86WT1 665 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 ZNF276Q8N554 614 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 ZFRQ96KR1 1074 aaKnown RBP12.47□□□□□ -0.41
RFC4-202ENST00000392481 FAM81BQ96LP2 452 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 KREMEN1Q96MU8 473 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 CRACR2AQ9BSW2 395 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 IER2Q9BTL4 223 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 LINC00597Q9H2U6 94 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 CHRDQ9H2X0 955 aa12.47□□□□□ -0.41
RFC4-202ENST00000392481 ECT2Q9H8V3 914 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms