RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 KYAT1Q16773 422 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 C10orf76Q5T2E6 689 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 TWF2Q6IBS0 349 aaKnown RBP19.86■□□□□ 0.77
CCDC50-202ENST00000392456 RBBP8NLQ8NC74 664 aaPredicted RBP19.86■□□□□ 0.77
CCDC50-202ENST00000392456 STK32AQ8WU08 396 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 SDCBP2Q9H190 292 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 OSGEPQ9NPF4 335 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 DPP3Q9NY33 737 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 A0A1W2PQ45 241 aaPredicted RBP19.86■□□□□ 0.77
CCDC50-202ENST00000392456 A0A1W2PQY0 241 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 M0QZ92 97 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 NCK2O43639 380 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 NDUFB5O43674 189 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 PEX11AO75192 247 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 TBXAS1P24557 533 aaPredicted RBP19.86■□□□□ 0.77
CCDC50-202ENST00000392456 POU5F1Q01860 360 aaKnown RBP19.86■□□□□ 0.77
CCDC50-202ENST00000392456 PTPROQ16827 1216 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 RASIP1Q5U651 963 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 RSPH3Q86UC2 560 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 SNRNP27Q8WVK2 155 aaKnown RBP19.86■□□□□ 0.77
CCDC50-202ENST00000392456 GLT1D1Q96MS3 346 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 CNTN6Q9UQ52 1028 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 LRCH1Q9Y2L9 728 aa19.86■□□□□ 0.77
CCDC50-202ENST00000392456 PALMO75781 387 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 GLI1P08151 1106 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 AFF1P51825 1210 aaKnown RBP19.85■□□□□ 0.77
CCDC50-202ENST00000392456 ZBTB6Q15916 424 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 TRIM71Q2Q1W2 868 aaKnown RBP19.85■□□□□ 0.77
CCDC50-202ENST00000392456 CLIP3Q96DZ5 547 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 NOX5Q96PH1 765 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 ZSWIM1Q9BR11 485 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 PARP2Q9UGN5 583 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 TACC1O75410 805 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 CYP1A1P04798 512 aaPredicted RBP19.85■□□□□ 0.77
CCDC50-202ENST00000392456 HOXD11P31277 338 aaPredicted RBP19.85■□□□□ 0.77
CCDC50-202ENST00000392456 CD52P31358 61 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 ORC1Q13415 861 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 ODF2Q5BJF6 829 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 SMC6Q96SB8 1091 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.85■□□□□ 0.77
CCDC50-202ENST00000392456 SMYD3Q9H7B4 428 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 NOD1Q9Y239 953 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 PCDHB2Q9Y5E7 798 aa19.85■□□□□ 0.77
CCDC50-202ENST00000392456 SCN1AP35498 2009 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 TCP1P17987 556 aaKnown RBP19.84■□□□□ 0.77
CCDC50-202ENST00000392456 C2CD6Q53TS8 623 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 RNF10Q8N5U6 811 aaKnown RBP19.84■□□□□ 0.77
CCDC50-202ENST00000392456 ZFP42Q96MM3 310 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 ISCUQ9H1K1 167 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 ITM2BQ9Y287 266 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 GRID2IPA4D2P6 1211 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 MOXD2PA6NHM9 499 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 ATMINO43313 823 aaPredicted RBP19.84■□□□□ 0.77
CCDC50-202ENST00000392456 ZNF132P52740 706 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 HPCAP84074 193 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 ZNF844Q08AG5 666 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 ARHGEF6Q15052 776 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 ZNF362Q5T0B9 420 aaPredicted RBP19.84■□□□□ 0.77
CCDC50-202ENST00000392456 ZNF618Q5T7W0 954 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 PASD1Q8IV76 773 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 HPDLQ96IR7 371 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 PBKQ96KB5 322 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 PSMB7Q99436 277 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 PPP1R12CQ9BZL4 782 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 PLEKHA5Q9HAU0 1116 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 GOLGA2P5Q9HBQ8 144 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 HMGXB4Q9UGU5 601 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 ZNF180Q9UJW8 692 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 PADI3Q9ULW8 664 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 PACSIN2Q9UNF0 486 aaPredicted RBP19.84■□□□□ 0.77
CCDC50-202ENST00000392456 RABL2BQ9UNT1 228 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 COG5Q9UP83 839 aa19.84■□□□□ 0.77
CCDC50-202ENST00000392456 SMIM28A0A1B0GU29 152 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 MGEA5O60502 916 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 CABYRO75952 493 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 FTCDO95954 541 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 GNA15P30679 374 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 YARSP54577 528 aaKnown RBP19.83■□□□□ 0.77
CCDC50-202ENST00000392456 LMNB2Q03252 620 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 SCUBE1Q8IWY4 988 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 ENDOVQ8N8Q3 282 aaKnown RBP19.83■□□□□ 0.77
CCDC50-202ENST00000392456 SLC35G2Q8TBE7 412 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 IFT81Q8WYA0 676 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 ZNF333Q96JL9 665 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 CNOT10Q9H9A5 744 aaKnown RBP19.83■□□□□ 0.77
CCDC50-202ENST00000392456 EPB41L5Q9HCM4 733 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 SAMD15Q9P1V8 674 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 CNTN3Q9P232 1028 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 INTUQ9ULD6 942 aa19.83■□□□□ 0.77
CCDC50-202ENST00000392456 MAGEA13PA6NCF6 341 aa19.83■□□□□ 0.76
CCDC50-202ENST00000392456 TJP3O95049 919 aa19.83■□□□□ 0.76
CCDC50-202ENST00000392456 PDGFRBP09619 1106 aa19.83■□□□□ 0.76
CCDC50-202ENST00000392456 PRMT2P55345 433 aa19.83■□□□□ 0.76
CCDC50-202ENST00000392456 SOX4Q06945 474 aaPredicted RBP19.83■□□□□ 0.76
CCDC50-202ENST00000392456 ZNF667Q5HYK9 610 aa19.83■□□□□ 0.76
CCDC50-202ENST00000392456 FBXO47Q5MNV8 452 aa19.83■□□□□ 0.76
CCDC50-202ENST00000392456 DAB2IPQ5VWQ8 1189 aa19.83■□□□□ 0.76
CCDC50-202ENST00000392456 CPA5Q8WXQ8 436 aa19.83■□□□□ 0.76
CCDC50-202ENST00000392456 LPPQ93052 612 aa19.83■□□□□ 0.76
CCDC50-202ENST00000392456 STARD7Q9NQZ5 370 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms