RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 MAGED4Q96JG8 741 aa16.69■□□□□ 0.26
SHANK1-204ENST00000391814 FAR2Q96K12 515 aa16.69■□□□□ 0.26
SHANK1-204ENST00000391814 FAM167AQ96KS9 214 aa16.69■□□□□ 0.26
SHANK1-204ENST00000391814 RBMX2Q9Y388 322 aaKnown RBP16.69■□□□□ 0.26
SHANK1-204ENST00000391814 NET1Q7Z628 596 aaPredicted RBP16.69■□□□□ 0.26
SHANK1-204ENST00000391814 RSPH1Q8WYR4 309 aa16.69■□□□□ 0.26
SHANK1-204ENST00000391814 UNKQ9C0B0 810 aaKnown RBP16.69■□□□□ 0.26
SHANK1-204ENST00000391814 PLAGL2Q9UPG8 496 aa16.69■□□□□ 0.26
SHANK1-204ENST00000391814 PCP4L1A6NKN8 68 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 POLRMTO00411 1230 aaKnown RBP16.68■□□□□ 0.26
SHANK1-204ENST00000391814 KRT36O76013 467 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 PDE9AO76083 593 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 MAP3K6O95382 1288 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 ASNSP08243 561 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 PTGER2P43116 358 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 ZNF284Q2VY69 593 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 TMEM8AQ9HCN3 771 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 COMMD8Q9NX08 183 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 ZNF180Q9UJW8 692 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 PTGES3LE9PB15 166 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 GSSP48637 474 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 CSE1LP55060 971 aaKnown RBP16.68■□□□□ 0.26
SHANK1-204ENST00000391814 UNC45BQ8IWX7 931 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 SVOPQ8N4V2 548 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 DCUN1D1Q96GG9 259 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 HLA-DRAP01903 254 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 RPA3P35244 121 aaPredicted RBP16.68■□□□□ 0.26
SHANK1-204ENST00000391814 PTENP60484 403 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 EFL1Q7Z2Z2 1120 aaKnown RBP16.68■□□□□ 0.26
SHANK1-204ENST00000391814 ATP6V1HQ9UI12 483 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 EIF3DO15371 548 aaKnown RBP eCLIP16.68■□□□□ 0.26
SHANK1-204ENST00000391814 HS6ST1O60243 411 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 RPS6KA5O75582 802 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 MLNP12872 115 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 NPEPPSP55786 919 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 ERVK-9P63128 1117 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 VAC14Q08AM6 782 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 PDK1Q15118 436 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 AGAP9Q5VTM2 703 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 SLC24A2Q9UI40 661 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 KANSL1LA0AUZ9 987 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 SAPCD2Q86UD0 394 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 SAR1AQ9NR31 198 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 MBD5Q9P267 1494 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 PBRM1Q86U86 1689 aa16.68■□□□□ 0.26
SHANK1-204ENST00000391814 ARHGEF5Q12774 1597 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 INO80Q9ULG1 1556 aaPredicted RBP16.67■□□□□ 0.26
SHANK1-204ENST00000391814 A0A0U1RQJ8 604 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 TNFRSF21O75509 655 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 SHBGP04278 402 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 ANPEPP15144 967 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 RRM2P31350 389 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 NDUFA5Q16718 116 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 DGKDQ16760 1214 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 ATG16L2Q8NAA4 619 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 GIPC3Q8TF64 312 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 ARHGAP20Q9P2F6 1191 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 CHI3L1P36222 383 aaPredicted RBP16.67■□□□□ 0.26
SHANK1-204ENST00000391814 CSNK2BP67870 215 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 ZNF571Q7Z3V5 609 aaPredicted RBP16.67■□□□□ 0.26
SHANK1-204ENST00000391814 RORBQ92753 470 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 SEMA4DQ92854 862 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 USP6P35125 1406 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 FDFT1P37268 417 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 MCL1Q07820 350 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 PTK6Q13882 451 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 PKN2Q16513 984 aaKnown RBP16.67■□□□□ 0.26
SHANK1-204ENST00000391814 KLHL12Q53G59 568 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 KCNT1Q5JUK3 1230 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 DENND1BQ6P3S1 775 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 TTC23LQ6PF05 361 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 C4orf22Q6V702 233 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 SH3TC2Q8TF17 1288 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 NINJ2Q9NZG7 142 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 CPA3P15088 417 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 KBTBD2Q8IY47 623 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 PPP1R10Q96QC0 940 aaKnown RBP16.67■□□□□ 0.26
SHANK1-204ENST00000391814 FLT1P17948 1338 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 ZNF335Q9H4Z2 1342 aaPredicted RBP16.67■□□□□ 0.26
SHANK1-204ENST00000391814 ETFBP38117 255 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 CAPZA2P47755 286 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 MRPS22P82650 360 aaKnown RBP16.67■□□□□ 0.26
SHANK1-204ENST00000391814 MTFR1Q15390 333 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 ZNF677Q86XU0 584 aa16.67■□□□□ 0.26
SHANK1-204ENST00000391814 CACHD1Q5VU97 1274 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 TMEM143Q96AN5 459 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 RIBC2Q9H4K1 309 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 BICRAQ9NZM4 1560 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 QRICH2Q9H0J4 1663 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 A0A087WXM4 84 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 PRKCBP05771 671 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 GRIK1P39086 918 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 ATP6AP1LQ52LC2 224 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 STRA8Q7Z7C7 330 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 TSPAN14Q8NG11 270 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 SPIRE2Q8WWL2 714 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 SEMA6BQ9H3T3 888 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 AGAP1Q9UPQ3 857 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 PCDHB2Q9Y5E7 798 aa16.66■□□□□ 0.26
SHANK1-204ENST00000391814 A8MUI8 341 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms