RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 NBL1P41271 181 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 SOX9P48436 509 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 PGFP49763 221 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 TUBP50607 506 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 KIF11P52732 1056 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 MAP3K7CLP57077 242 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 KCNH2Q12809 1159 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 RUNX3Q13761 415 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 MTF1Q14872 753 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 PDGFRLQ15198 375 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 GPRIN1Q7Z2K8 1008 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 SH3RF2Q8TEC5 729 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 OSCP1Q8WVF1 389 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 FBXO32Q969P5 355 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 ZFRQ96KR1 1074 aaKnown RBP12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 UBXN6Q9BZV1 441 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 CHRDQ9H2X0 955 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 FBXO44Q9H4M3 255 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 CHORDC1Q9UHD1 332 aaPredicted RBP12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 SCML2Q9UQR0 700 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 USP3Q9Y6I4 520 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 SDK1Q7Z5N4 2213 aa12.05□□□□□ -0.48
IGHV4-28-201ENST00000390612 LEFTY2O00292 366 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 FGFR1OPO95684 399 aaKnown RBP12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 ARSAP15289 507 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 TBXAS1P24557 533 aaPredicted RBP12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 ADORA2BP29275 332 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 EML3Q32P44 896 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 ZNF394Q53GI3 561 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 TRIM68Q6AZZ1 485 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 RBM43Q6ZSC3 357 aaKnown RBP12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 ZNF276Q8N554 614 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 EHBP1Q8NDI1 1231 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 NELL1Q92832 810 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 ATOH1Q92858 354 aaPredicted RBP12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 HEXIM2Q96MH2 286 aaKnown RBP12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 IPO9Q96P70 1041 aaKnown RBP12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 IER2Q9BTL4 223 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 DNAI2Q9GZS0 605 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 LINC00597Q9H2U6 94 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 EBF3Q9H4W6 596 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 LMAN1LQ9HAT1 526 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 GMIPQ9P107 970 aa12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 NDRG2Q9UN36 371 aaKnown RBP12.04□□□□□ -0.48
IGHV4-28-201ENST00000390612 RNF225M0QZC1 329 aaPredicted RBP12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 TRDMT1O14717 391 aaKnown RBP12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 COCHO43405 550 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 AFPP02771 609 aaKnown RBP12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 CCDC192P0DO97 292 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 TRIM21P19474 475 aaKnown RBP12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 KPNA1P52294 538 aaPredicted RBP12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 CCINQ13939 588 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 GAS6Q14393 721 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 GAB4Q2WGN9 574 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 ZNF528Q3MIS6 628 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 PKDCCQ504Y2 493 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 RAB41Q5JT25 222 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 HECTD3Q5T447 861 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 TTC30AQ86WT1 665 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 ANKRD52Q8NB46 1076 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 TTC8Q8TAM2 541 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 GPT2Q8TD30 523 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 NT5C1BQ96P26 610 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 NUP62CLQ9H1M0 184 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 ECT2Q9H8V3 914 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 CYLDQ9NQC7 956 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 FAM86C1Q9NVL1 165 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 OSER1Q9NX31 292 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 DUS2Q9NX74 493 aaKnown RBP12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 FBXO4Q9UKT5 387 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 KIAA1257Q9ULG3 409 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 CNTN6Q9UQ52 1028 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 CPQQ9Y646 472 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 WNT6Q9Y6F9 365 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 DMXL1Q9Y485 3027 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 EML5Q05BV3 1969 aa12.03□□□□□ -0.48
IGHV4-28-201ENST00000390612 ABL1P00519 1130 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 PAEPP09466 180 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 SP9P0CG40 484 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 TDGF1P13385 188 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 ERCC5P28715 1186 aaPredicted RBP12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 GJA4P35212 333 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 MRE11P49959 708 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 ZNF132P52740 706 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 YWHAEP62258 255 aaKnown RBP12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 GCNT1Q02742 428 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 IFRD2Q12894 506 aaPredicted RBP12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 LRMPQ12912 555 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 MTAPQ13126 283 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 DPCR1Q3MIW9 517 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 TMEM196Q5HYL7 178 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 CT47A1Q5JQC4 288 aaPredicted RBP12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 DGKKQ5KSL6 1271 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 CC2D1AQ6P1N0 951 aaPredicted RBP12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 KLHDC10Q6PID8 442 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 CCDC186Q7Z3E2 898 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 SCD5Q86SK9 330 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 ARHGEF19Q8IW93 802 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 ADGRG2Q8IZP9 1017 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms