RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 CCDC77Q9BR77 488 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 MRPS26Q9BYN8 205 aaKnown RBP3.6□□□□□ -1.83
TRAV39-201ENST00000390466 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 ADAM33Q9BZ11 813 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 PPP1R12CQ9BZL4 782 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 INO80BQ9C086 356 aaPredicted RBP3.6□□□□□ -1.83
TRAV39-201ENST00000390466 GLT8D2Q9H1C3 349 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 ZHX3Q9H4I2 956 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 ZNF395Q9H8N7 513 aaPredicted RBP3.6□□□□□ -1.83
TRAV39-201ENST00000390466 POPDC2Q9HBU9 364 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 PCDH18Q9HCL0 1135 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 ALG13Q9NP73 1137 aaKnown RBP3.6□□□□□ -1.83
TRAV39-201ENST00000390466 RHBDL2Q9NX52 303 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 HSPBP1Q9NZL4 362 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 KCND2Q9NZV8 630 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 ITGA11Q9UKX5 1188 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 EMCNQ9ULC0 261 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 SOX13Q9UN79 622 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 PSMD13Q9UNM6 376 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 POMPQ9Y244 141 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 INPP5FQ9Y2H2 1132 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 WDR37Q9Y2I8 494 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 SH3GLB1Q9Y371 365 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 TEX264Q9Y6I9 313 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 MCM3APO60318 1980 aa3.6□□□□□ -1.83
TRAV39-201ENST00000390466 WDR90Q96KV7 1748 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TCRBV9S1A1TA0A576 114 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TMEM191CA6NGB0 347 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CAPN8A6NHC0 703 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CXorf49A8MYA2 514 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 FAM155AB1AL88 458 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SPECC1L-ADORA2AF8WAN1 911 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 GOLGA8RI6L899 631 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CYB561D2O14569 222 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 DHX15O43143 795 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ITM2AO43736 263 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 UGT1A9O60656 530 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ENDOD1O94919 500 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 LYPLA2O95372 231 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 FUCA1P04066 466 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 OATP04181 439 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 BPGMP07738 259 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 LDHCP07864 332 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 VIL1P09327 827 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TMEM191BP0C7N4 346 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SETSIPP0DME0 302 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SLURP2P0DP57 97 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 RBP3P10745 1247 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 FGF3P11487 239 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 KRT10P13645 584 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 RAG1P15918 1043 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PORP16435 677 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ZNF23P17027 643 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ZNF26P17031 533 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CD58P19256 250 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PRKCHP24723 683 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PMLP29590 882 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PRDX6P30041 224 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CDH5P33151 784 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 RPL22P35268 128 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TIE1P35590 1138 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 BAG6P46379 1132 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ACADVLP49748 655 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CDK9P50750 372 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ARSEP51690 589 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PRELPP51888 382 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 MTTPP55157 894 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ADARP55265 1226 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 RPS3AP61247 264 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SNRPFP62306 86 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 YWHAZP63104 245 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TXNL4AP83876 142 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SLC25A3Q00325 362 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 GHRHRQ02643 423 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SLC25A11Q02978 314 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 FOLH1Q04609 750 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 FAAP100Q0VG06 881 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 NFX1Q12986 1120 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 GPS1Q13098 491 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 MPP3Q13368 585 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 MAMLD1Q13495 774 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 MED21Q13503 144 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SPIDRQ14159 915 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 NFIXQ14938 502 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TGFBIQ15582 683 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ZRSR2Q15696 482 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 VPS72Q15906 364 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 HIF1AQ16665 826 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 KLHL38Q2WGJ6 581 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ANKDD1AQ495B1 522 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 USH1GQ495M9 461 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 MDH1BQ5I0G3 518 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 RALGPS1Q5JS13 557 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 HP1BP3Q5SSJ5 553 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SYCP2LQ5T4T6 812 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 RASIP1Q5U651 963 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ANGEL2Q5VTE6 544 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 MBLAC2Q68D91 279 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CCDC62Q6P9F0 684 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CCDC174Q6PII3 467 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms