RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 LIN52Q52LA3 116 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 RNF149Q8NC42 400 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 PSPC1Q8WXF1 523 aaKnown RBP14.78□□□□□ -0.04
RTF1-201ENST00000389629 JADE3Q92613 823 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 NIF3L1Q9GZT8 377 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 TASP1Q9H6P5 420 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 GAKO14976 1311 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 SMAPO00193 183 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 MGEA5O60502 916 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 IL10P22301 178 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 CHN2P52757 468 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 GCNT1Q02742 428 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 GABPAQ06546 454 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 TRIM16LQ309B1 348 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 KBTBD12Q3ZCT8 623 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 GCOM2Q9BZD3 368 aaPredicted RBP14.78□□□□□ -0.04
RTF1-201ENST00000389629 VAV3Q9UKW4 847 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 ECHS1P30084 290 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 NCKAP1LP55160 1127 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 TAS2R40P59535 323 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 MRPS22P82650 360 aaKnown RBP14.78□□□□□ -0.04
RTF1-201ENST00000389629 UBAP2LQ14157 1087 aaKnown RBP14.78□□□□□ -0.04
RTF1-201ENST00000389629 STXBP2Q15833 593 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 DENND5BQ6ZUT9 1274 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 KATNAL2Q8IYT4 538 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 ULK2Q8IYT8 1036 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 ZNF606Q8WXB4 792 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 NR1H4Q96RI1 486 aaPredicted RBP14.78□□□□□ -0.04
RTF1-201ENST00000389629 CADM1Q9BY67 442 aaKnown RBP14.78□□□□□ -0.04
RTF1-201ENST00000389629 NMUR2Q9GZQ4 415 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 PALMDQ9NP74 551 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 V9GYQ6 96 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 ADGRA3Q8IWK6 1321 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 CRYBG1Q9Y4K1 1723 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 GSTA4O15217 222 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 STMN1P16949 149 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 RAB27AP51159 221 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 SCNN1BP51168 640 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 FAM47CQ5HY64 1035 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 SLC9A9Q8IVB4 645 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 UBA3Q8TBC4 463 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 COPS7BQ9H9Q2 264 aaPredicted RBP14.78□□□□□ -0.04
RTF1-201ENST00000389629 WDR35Q9P2L0 1181 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 LAMA4Q16363 1823 aa14.78□□□□□ -0.04
RTF1-201ENST00000389629 CYP3A4P08684 503 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 SNHG28P0DPA3 235 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 TFE3P19532 575 aaPredicted RBP14.77□□□□□ -0.04
RTF1-201ENST00000389629 GALK1P51570 392 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 AP3M2P53677 418 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 CCDC15Q0P6D6 951 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 BNC2Q6ZN30 1099 aaPredicted RBP14.77□□□□□ -0.04
RTF1-201ENST00000389629 ZBTB46Q86UZ6 589 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 CDR2LQ86X02 465 aaPredicted RBP14.77□□□□□ -0.04
RTF1-201ENST00000389629 NUP93Q8N1F7 819 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 ZDHHC15Q96MV8 337 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 FBXO40Q9UH90 709 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 C5P01031 1676 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 FOXD4Q12950 439 aaPredicted RBP14.77□□□□□ -0.04
RTF1-201ENST00000389629 PLEKHA7Q6IQ23 1121 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 APOBEC3HQ6NTF7 200 aaKnown RBP14.77□□□□□ -0.04
RTF1-201ENST00000389629 LRRC8BQ6P9F7 803 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 MTHFD1LQ6UB35 978 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 DHDDSQ86SQ9 333 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 DIS3LQ8TF46 1054 aaKnown RBP14.77□□□□□ -0.04
RTF1-201ENST00000389629 PIDD1Q9HB75 910 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 FNDC3AQ9Y2H6 1198 aaKnown RBP14.77□□□□□ -0.04
RTF1-201ENST00000389629 ORC6Q9Y5N6 252 aa14.77□□□□□ -0.04
RTF1-201ENST00000389629 LIASO43766 372 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 TNFAIP8O95379 198 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 ALADP13716 330 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 GARTP22102 1010 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 STIP1P31948 543 aaKnown RBP14.77□□□□□ -0.05
RTF1-201ENST00000389629 CCNFP41002 786 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 KPNA2P52292 529 aaKnown RBP14.77□□□□□ -0.05
RTF1-201ENST00000389629 C1QBPQ07021 282 aaKnown RBP14.77□□□□□ -0.05
RTF1-201ENST00000389629 BST1Q10588 318 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 ANO4Q32M45 955 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 C16orf46Q6P387 395 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 SEPT12Q8IYM1 358 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 SEMA4DQ92854 862 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 LENG1Q96BZ8 264 aaPredicted RBP14.77□□□□□ -0.05
RTF1-201ENST00000389629 SGF29Q96ES7 293 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 MECRQ9BV79 373 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 RPAP3Q9H6T3 665 aaPredicted RBP14.77□□□□□ -0.05
RTF1-201ENST00000389629 PKD2L2Q9NZM6 624 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 ZMYM2Q9UBW7 1377 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 MAPK10P53779 464 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 HIRAP54198 1017 aaPredicted RBP14.77□□□□□ -0.05
RTF1-201ENST00000389629 RAB44Q7Z6P3 723 aaPredicted RBP14.77□□□□□ -0.05
RTF1-201ENST00000389629 CLVS1Q8IUQ0 354 aaPredicted RBP14.77□□□□□ -0.05
RTF1-201ENST00000389629 TMEM79Q9BSE2 394 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 MTMR12Q9C0I1 747 aa14.77□□□□□ -0.05
RTF1-201ENST00000389629 E2F6O75461 281 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 VIL1P09327 827 aaKnown RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 MAPTP10636 758 aaKnown RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 ATICP31939 592 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 MLH1P40692 756 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 USP46P62068 366 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 NRF1Q16656 503 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 ACSBG2Q5FVE4 666 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms