RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 AGGF1Q8N302 714 aaeCLIP5.17□□□□□ -1.58
LTN1-202ENST00000389194 AENQ8WTP8 325 aaKnown RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 DNAJB3Q8WWF6 145 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 TUBGCP3Q96CW5 907 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 SERPINB12Q96P63 405 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 SENP6Q9GZR1 1112 aaPredicted RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 PIDD1Q9HB75 910 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 ERVK-5Q9HDB9 667 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 NINJ2Q9NZG7 142 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 CDYLQ9Y232 598 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 NRXN1Q9ULB1 1477 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 VWDEQ8N2E2 1590 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 WNT10BO00744 389 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 PRRG1O14668 218 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 SUPT20HL2P0C7V6 817 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 ERVK-10P10266 1014 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 INSRRP14616 1297 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 ALDH5A1P51649 535 aaPredicted RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 ADIGQ0VDE8 80 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 SAPCD2Q86UD0 394 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 CCDC60Q8IWA6 550 aaPredicted RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 DEFB107AQ8IZN7 70 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 PARP8Q8N3A8 854 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 URGCPQ8TCY9 931 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 PYDC1Q8WXC3 89 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 RPRD1AQ96P16 312 aaPredicted RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 CCT7Q99832 543 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 C17orf80Q9BSJ5 609 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 MECRQ9BV79 373 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 MYLK2Q9H1R3 596 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 DDX18Q9NVP1 670 aaKnown RBP5.17□□□□□ -1.58
LTN1-202ENST00000389194 SMPD4Q9NXE4 827 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 AP4E1Q9UPM8 1137 aa5.17□□□□□ -1.58
LTN1-202ENST00000389194 A8MUI8 341 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 CYB561D2O14569 222 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 ZC3H11AO75152 810 aaKnown RBP eCLIP5.16□□□□□ -1.582e-6■□□□□ 8.9
LTN1-202ENST00000389194 CELF2O95319 508 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 ATP6V1G2O95670 118 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 F7P08709 466 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 CCND1P24385 295 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 MAP4P27816 1152 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 PBLDP30039 288 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 FNTAP49354 379 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 RABGGTBP53611 331 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 EFEMP1Q12805 493 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 IZUMO2Q6UXV1 221 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 PALB2Q86YC2 1186 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 TEX9Q8N6V9 391 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 NDRG1Q92597 394 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 GCNAQ96QF7 691 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 NT5MQ9NPB1 228 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.16□□□□□ -1.58
LTN1-202ENST00000389194 GRID1Q9ULK0 1009 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 TMX2Q9Y320 296 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 MOXD2PA6NHM9 499 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 ASB14A6NK59 587 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 PHGDHO43175 533 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 RHOBTB1O94844 696 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 PROSCO94903 275 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 HMGCRP04035 888 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 STMN1P16949 149 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 ZFXP17010 805 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 NELFEP18615 380 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 GARTP22102 1010 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 IL10P22301 178 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 CYP2F1P24903 491 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 SPRP35270 261 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 COPAP53621 1224 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 HUNKP57058 714 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 UGCGQ16739 394 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 IER5Q5VY09 327 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 MAP1SQ66K74 1059 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 ZNF467Q7Z7K2 595 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 IRF2BP1Q8IU81 584 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 COLGALT1Q8NBJ5 622 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 SEPHS2Q99611 448 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 DCLK3Q9C098 648 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 BRD8Q9H0E9 1235 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 NR5A2O00482 541 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 BEX3Q00994 111 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 PTRHD1Q6GMV3 140 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 DENND1BQ6P3S1 775 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 RINLQ6ZS11 566 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 MED15Q96RN5 788 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 THUMPD3Q9BV44 507 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 MAGEB5Q9BZ81 275 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 GPR63Q9BZJ6 419 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 EXOSC4Q9NPD3 245 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 ANKEF1Q9NU02 776 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 SENP1Q9P0U3 644 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 ARHGEF28Q8N1W1 1705 aaKnown RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 SAC3D1A6NKF1 404 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 E5RJQ4 531 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 BAIAP3O94812 1187 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 PIRTP0C851 137 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 RBL1P28749 1068 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 GTF2H3Q13889 308 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 OTUD3Q5T2D3 398 aaPredicted RBP5.16□□□□□ -1.58
LTN1-202ENST00000389194 SLC30A9Q6PML9 568 aa5.16□□□□□ -1.58
LTN1-202ENST00000389194 SH3RF1Q7Z6J0 888 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms