RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.1□□□□□ -1.43
ERCC4-202ENST00000389138 NINJ2Q9NZG7 142 aa6.1□□□□□ -1.43
ERCC4-202ENST00000389138 ACTR3BQ9P1U1 418 aa6.1□□□□□ -1.43
ERCC4-202ENST00000389138 NOSIPQ9Y314 301 aaKnown RBP6.1□□□□□ -1.43
ERCC4-202ENST00000389138 RBBP6Q7Z6E9 1792 aaKnown RBP6.09□□□□□ -1.43
ERCC4-202ENST00000389138 SZT2Q5T011 3432 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 GNAT3A8MTJ3 354 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 FOXD2O60548 495 aaPredicted RBP6.09□□□□□ -1.43
ERCC4-202ENST00000389138 FRAT2O75474 233 aaPredicted RBP6.09□□□□□ -1.43
ERCC4-202ENST00000389138 IPO7O95373 1038 aaKnown RBP6.09□□□□□ -1.43
ERCC4-202ENST00000389138 SCGB1D1O95968 90 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 CLEC2LP0C7M8 214 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 EPHX2P34913 555 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 PSMC4P43686 418 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 SNRPNP63162 240 aaKnown RBP6.09□□□□□ -1.43
ERCC4-202ENST00000389138 GALNT2Q10471 571 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 CHAF1BQ13112 559 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 POU4F3Q15319 338 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 PPP1R7Q15435 360 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 RAB30Q15771 203 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 ZNF805Q5CZA5 627 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 BORAQ6PGQ7 559 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 OLFM4Q6UX06 510 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 ZNF574Q6ZN55 896 aaPredicted RBP6.09□□□□□ -1.43
ERCC4-202ENST00000389138 CDH24Q86UP0 819 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 OXR1Q8N573 874 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 USP38Q8NB14 1042 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 NUDT8Q8WV74 236 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 EAF2Q96CJ1 260 aaPredicted RBP6.09□□□□□ -1.43
ERCC4-202ENST00000389138 CALML4Q96GE6 196 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 VPS50Q96JG6 964 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 FEM1CQ96JP0 617 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 CCDC114Q96M63 670 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 C1orf21Q9H246 121 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 SEMA4AQ9H3S1 761 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 NCOR1P1Q9H4R4 102 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 SNTG1Q9NSN8 517 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 ZNHIT6Q9NWK9 470 aaKnown RBP6.09□□□□□ -1.43
ERCC4-202ENST00000389138 COL20A1Q9P218 1284 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 FAM153AQ9UHL3 310 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 HACL1Q9UJ83 578 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 CBLCQ9ULV8 474 aa6.09□□□□□ -1.43
ERCC4-202ENST00000389138 MYPNQ86TC9 1320 aa6.09□□□□□ -1.44
ERCC4-202ENST00000389138 CNTNAP5Q8WYK1 1306 aa6.09□□□□□ -1.44
ERCC4-202ENST00000389138 PTGES3LE9PB15 166 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 H0YIN7 160 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 PDE2AO00408 941 aaPredicted RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 PIP5K1BO14986 540 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 ASNA1O43681 348 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 MTRF1O75570 445 aaKnown RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 OLFM2O95897 454 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 KELP23276 732 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 EIF2DP41214 584 aaKnown RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 CRKLP46109 303 aaKnown RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 CPA2P48052 419 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 KCNC1P48547 511 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 AFF1P51825 1210 aaKnown RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 PCDH1Q08174 1060 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 PRPF4BQ13523 1007 aaKnown RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 SEC23AQ15436 765 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 MCTP2Q6DN12 878 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 ZCCHC12Q6PEW1 402 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 VN1R5Q7Z5H4 357 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 SPATA2LQ8IUW3 424 aaPredicted RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 CTCFLQ8NI51 663 aaPredicted RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 DEPDC1BQ8WUY9 529 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 MSLNLQ96KJ4 702 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 METTL22Q9BUU2 404 aaPredicted RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 KRT23Q9C075 422 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 ERVMER34-1Q9H9K5 563 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 COPS7BQ9H9Q2 264 aaPredicted RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 TOMM22Q9NS69 142 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 TAS2R3Q9NYW6 316 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 GPR55Q9Y2T6 319 aaPredicted RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 SLC30A1Q9Y6M5 507 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 KIF24Q5T7B8 1368 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 ZNF541Q9H0D2 1346 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 FAM177BA6PVY3 158 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 PODXLO00592 558 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 RGS13O14921 159 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 VILLO15195 856 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 TSC22D2O75157 780 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 BCAS2O75934 225 aaPredicted RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 AFPP02771 609 aaKnown RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 OPN1MWP04001 364 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 OPN1MW2P0DN77 364 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 OPN1MW3P0DN78 364 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 LAMP2P13473 410 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 ALADP13716 330 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 NID1P14543 1247 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 BRAFP15056 766 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 FERP16591 822 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 GNAT2P19087 354 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 EIF2S2P20042 333 aaKnown RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 CD9P21926 228 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 RABIFP47224 123 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 BMPR2Q13873 1038 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 DCAF17Q5H9S7 520 aaPredicted RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 ESRP1Q6NXG1 681 aaKnown RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 PHACTR4Q8IZ21 702 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms