RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 ZNF783Q6ZMS7 281 aa3.18□□□□□ -1.9
RNU6-1040P-201ENST00000383974 DEF8Q6ZN54 512 aa3.18□□□□□ -1.9
RNU6-1040P-201ENST00000383974 LIX1LQ8IVB5 337 aa3.18□□□□□ -1.9
RNU6-1040P-201ENST00000383974 ZNF548Q8NEK5 533 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1040P-201ENST00000383974 MAFAQ8NHW3 353 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1040P-201ENST00000383974 PPP2R3CQ969Q6 453 aa3.18□□□□□ -1.9
RNU6-1040P-201ENST00000383974 CHMP4CQ96CF2 233 aa3.18□□□□□ -1.9
RNU6-1040P-201ENST00000383974 NUP88Q99567 741 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1040P-201ENST00000383974 SLC12A5Q9H2X9 1139 aa3.18□□□□□ -1.9
RNU6-1040P-201ENST00000383974 POT1Q9NUX5 634 aa3.18□□□□□ -1.9
RNU6-1040P-201ENST00000383974 SQORQ9Y6N5 450 aa3.18□□□□□ -1.9
RNU6-1040P-201ENST00000383974 FAM90A8PA6NJQ4 464 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 CNOT3O75175 753 aaKnown RBP3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 CRYABP02511 175 aaKnown RBP3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 FAM90A13PP0C7W8 464 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 FAM90A24PP0C7X0 464 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 PF4V1P10720 104 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 BCAT1P54687 386 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 CCNIQ14094 377 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 KCNB1Q14721 858 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 DCDC5Q6ZRR9 648 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 ANKRD13BQ86YJ7 626 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 SPARTQ8N0X7 666 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 MPP5Q8N3R9 675 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 SMRP1Q8NCR6 262 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 DNAJB14Q8TBM8 379 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 KBTBD7Q8WVZ9 684 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 IGFBPL1Q8WX77 278 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 CTHRC1Q96CG8 243 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 C1GALT1C1Q96EU7 318 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 LYZL4Q96KX0 146 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 NT5C1BQ96P26 610 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 TCF7L1Q9HCS4 588 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 SNX15Q9NRS6 342 aa3.17□□□□□ -1.9
RNU6-1040P-201ENST00000383974 TTC3P53804 2025 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 A0A088AWK7 358 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 M0R3H8 397 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 BTN3A1O00481 513 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 SPRY2O43597 315 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 SRGAP2O75044 1071 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 OFD1O75665 1012 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 VCAM1P19320 739 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 RPS13P62277 151 aaKnown RBP3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 YPEL5P62699 121 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 SLC13A2Q13183 592 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 ERV3-1Q14264 604 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 SEMA3AQ14563 771 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 BRDTQ58F21 947 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 IFIT1BQ5T764 474 aaKnown RBP3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 DENND2CQ68D51 928 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 ANO7Q6IWH7 933 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 RANBP10Q6VN20 620 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 ARFGAP1Q8N6T3 406 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 OR6B3Q8NGW1 331 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 DIS3LQ8TF46 1054 aaKnown RBP3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 WDYHV1Q96HA8 205 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 HS6ST2Q96MM7 605 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 VN1R3Q9BXE9 311 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 DPH1Q9BZG8 443 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 ZMAT3Q9HA38 289 aaKnown RBP3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 IP6K2Q9UHH9 426 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 HS3ST3B1Q9Y662 390 aa3.16□□□□□ -1.9
RNU6-1040P-201ENST00000383974 A0A1W2PPL8 197 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 B4DGG1 531 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 SMAD6O43541 496 aaKnown RBP3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CTSAP10619 480 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 KITP10721 976 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CREB1P16220 341 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ATF7P17544 494 aaPredicted RBP3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 NCLP19338 710 aaKnown RBP3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 HTR1BP28222 390 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 EPHA3P29320 983 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 PRKAR1BP31321 381 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ME1P48163 572 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 MTHFSP49914 203 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CC2D1BQ5T0F9 858 aaKnown RBP3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 DCAF12L1Q5VU92 463 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 COLCA1Q6ZS62 124 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 DAAM2Q86T65 1068 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 PIM3Q86V86 326 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 RAB11FIP4Q86YS3 637 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 DENND1CQ8IV53 801 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ZFYVE19Q96K21 471 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CAMK1GQ96NX5 476 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 FAM234AQ9H0X4 552 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 SMURF2Q9HAU4 748 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ZBTB40Q9NUA8 1239 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 ZSCAN32Q9NX65 697 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 DNMT3BQ9UBC3 853 aaKnown RBP3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 GABBR1Q9UBS5 961 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 USP22Q9UPT9 525 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 CDY1Q9Y6F8 540 aa3.15□□□□□ -1.91
RNU6-1040P-201ENST00000383974 H3BML4 177 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 GTPBP1O00178 669 aaKnown RBP3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 TMPRSS11DO60235 418 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 TULP3O75386 442 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 UBXN7O94888 489 aa3.14□□□□□ -1.91
RNU6-1040P-201ENST00000383974 UQCRC1P31930 480 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms