RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 MAGEC2Q9UBF1 373 aaPredicted RBP18.52■□□□□ 0.56
HMGN1-203ENST00000380748 PCOLCE2Q9UKZ9 415 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 CFAP46Q8IYW2 2715 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 MAOBP27338 520 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 GRIK1P39086 918 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 LHX1P48742 406 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 SOWAHAQ2M3V2 549 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 C10orf76Q5T2E6 689 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 VSTM1Q6UX27 236 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 C4orf50Q6ZRC1 276 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 TOP6BLQ8N6T0 577 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 LRRC52Q8N7C0 313 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 FAM184AQ8NB25 1140 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 ZSWIM2Q8NEG5 633 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 ZNF419Q96HQ0 510 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-203ENST00000380748 SYT15Q9BQS2 421 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 FAM213AQ9BRX8 229 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 FAM124BQ9H5Z6 455 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-203ENST00000380748 CD248Q9HCU0 757 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 CRTAC1Q9NQ79 661 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 DKK4Q9UBT3 224 aa18.51■□□□□ 0.55
HMGN1-203ENST00000380748 GOLGA4Q13439 2230 aaKnown RBP18.51■□□□□ 0.55
HMGN1-203ENST00000380748 TRIM24O15164 1050 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 TBCAO75347 108 aaKnown RBP18.5■□□□□ 0.55
HMGN1-203ENST00000380748 ZNF217O75362 1048 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 TULP3O75386 442 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 KRT18P05783 430 aaKnown RBP18.5■□□□□ 0.55
HMGN1-203ENST00000380748 KRT19P08727 400 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 MBL2P11226 248 aaPredicted RBP18.5■□□□□ 0.55
HMGN1-203ENST00000380748 LMO2P25791 158 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 GAD2Q05329 585 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 CYP4F3Q08477 520 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 MCM6Q14566 821 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 EGFLAMQ63HQ2 1017 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 TMPRSS7Q7RTY8 843 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 CSGALNACT2Q8N6G5 542 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 TERB1Q8NA31 727 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 KCNV2Q8TDN2 545 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 ACOX2Q99424 681 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 SLC6A17Q9H1V8 727 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 IL21RQ9HBE5 538 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 BLOC1S4Q9NUP1 217 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 TOR4AQ9NXH8 423 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 SUSD2Q9UGT4 822 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 SIX4Q9UIU6 781 aa18.5■□□□□ 0.55
HMGN1-203ENST00000380748 ANXA13P27216 316 aa18.49■□□□□ 0.55
HMGN1-203ENST00000380748 NTSR1P30989 418 aa18.49■□□□□ 0.55
HMGN1-203ENST00000380748 HMGN5P82970 282 aaKnown RBP18.49■□□□□ 0.55
HMGN1-203ENST00000380748 CYP27A1Q02318 531 aa18.49■□□□□ 0.55
HMGN1-203ENST00000380748 C19orf57Q0VDD7 668 aa18.49■□□□□ 0.55
HMGN1-203ENST00000380748 BRSK2Q8IWQ3 736 aa18.49■□□□□ 0.55
HMGN1-203ENST00000380748 IPO4Q8TEX9 1081 aaKnown RBP18.49■□□□□ 0.55
HMGN1-203ENST00000380748 SETD7Q8WTS6 366 aaKnown RBP18.49■□□□□ 0.55
HMGN1-203ENST00000380748 KBTBD7Q8WVZ9 684 aa18.49■□□□□ 0.55
HMGN1-203ENST00000380748 SAAL1Q96ER3 474 aa18.49■□□□□ 0.55
HMGN1-203ENST00000380748 CEP295NLQ96MC4 621 aa18.49■□□□□ 0.55
HMGN1-203ENST00000380748 KIAA1522Q9P206 1035 aaPredicted RBP18.49■□□□□ 0.55
HMGN1-203ENST00000380748 TBC1D14Q9P2M4 693 aa18.49■□□□□ 0.55
HMGN1-203ENST00000380748 DEC1Q9P2X7 70 aa18.49■□□□□ 0.55
HMGN1-203ENST00000380748 ITGA11Q9UKX5 1188 aa18.49■□□□□ 0.55
HMGN1-203ENST00000380748 LIMCH1Q9UPQ0 1083 aa18.49■□□□□ 0.55
HMGN1-203ENST00000380748 E2F8A0AVK6 867 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 F8VP50 259 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 HOXC11O43248 304 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-203ENST00000380748 NDUFS2O75306 463 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 C1QL1O75973 258 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 GNSP15586 552 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 ABCD1P33897 745 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 PPP3CCP48454 512 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 NOP14P78316 857 aaKnown RBP18.48■□□□□ 0.55
HMGN1-203ENST00000380748 TAF10Q12962 218 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 SYCP2LQ5T4T6 812 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 BTBD8Q5XKL5 378 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 DDX42Q86XP3 938 aaKnown RBP eCLIP18.48■□□□□ 0.554e-6■□□□□ 10.9
HMGN1-203ENST00000380748 CACTINQ8WUQ7 758 aaKnown RBP18.48■□□□□ 0.55
HMGN1-203ENST00000380748 ZFRQ96KR1 1074 aaKnown RBP18.48■□□□□ 0.55
HMGN1-203ENST00000380748 ZDHHC5Q9C0B5 715 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 ST6GALNAC4Q9H4F1 302 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 CDH9Q9ULB4 789 aa18.48■□□□□ 0.55
HMGN1-203ENST00000380748 ZNF462Q96JM2 2506 aa18.47■□□□□ 0.55
HMGN1-203ENST00000380748 A0A087WV48 116 aa18.47■□□□□ 0.55
HMGN1-203ENST00000380748 TRABD2BA6NFA1 517 aa18.47■□□□□ 0.55
HMGN1-203ENST00000380748 TRIM66O15016 1216 aa18.47■□□□□ 0.55
HMGN1-203ENST00000380748 ZBTB24O43167 697 aaPredicted RBP18.47■□□□□ 0.55
HMGN1-203ENST00000380748 ATXN1LP0C7T5 689 aaKnown RBP18.47■□□□□ 0.55
HMGN1-203ENST00000380748 RBP5P82980 135 aa18.47■□□□□ 0.55
HMGN1-203ENST00000380748 KCNA1Q09470 495 aa18.47■□□□□ 0.55
HMGN1-203ENST00000380748 TMEM25Q86YD3 366 aa18.47■□□□□ 0.55
HMGN1-203ENST00000380748 CHPFQ8IZ52 775 aa18.47■□□□□ 0.55
HMGN1-203ENST00000380748 PCED1BQ96HM7 432 aa18.47■□□□□ 0.55
HMGN1-203ENST00000380748 UBL7Q96S82 380 aaPredicted RBP18.47■□□□□ 0.55
HMGN1-203ENST00000380748 MTMR12Q9C0I1 747 aa18.47■□□□□ 0.55
HMGN1-203ENST00000380748 RBAKQ9NYW8 714 aaPredicted RBP18.47■□□□□ 0.55
HMGN1-203ENST00000380748 EHD2Q9NZN4 543 aa18.47■□□□□ 0.55
HMGN1-203ENST00000380748 RAD54BQ9Y620 910 aa18.47■□□□□ 0.55
HMGN1-203ENST00000380748 SHROOM3Q8TF72 1996 aa18.46■□□□□ 0.55
HMGN1-203ENST00000380748 PDGFRBP09619 1106 aa18.46■□□□□ 0.55
HMGN1-203ENST00000380748 CACNA2D1P54289 1103 aa18.46■□□□□ 0.55
HMGN1-203ENST00000380748 IFRD2Q12894 506 aaPredicted RBP18.46■□□□□ 0.55
HMGN1-203ENST00000380748 POSTNQ15063 836 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms