RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 RPL9P32969 192 aaKnown RBP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 ZNF211Q13398 564 aaPredicted RBP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 TCEA2Q15560 299 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 C6orf10Q5SRN2 563 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 FBXO16Q8IX29 292 aaPredicted RBP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 CCDC3Q9BQI4 270 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 SLC39A8Q9C0K1 460 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 METTL5Q9NRN9 209 aaKnown RBP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 TMEM161AQ9NX61 479 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 CLUHO75153 1309 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 ERI2A8K979 691 aaKnown RBP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 NR2C2P49116 596 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 GCNT1Q02742 428 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 TMEM62Q0P6H9 643 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 LAMTOR4Q0VGL1 99 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 CSTF3Q12996 717 aaKnown RBP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 PGM5Q15124 567 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 HIBCHQ6NVY1 386 aaPredicted RBP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 ASB2Q96Q27 587 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 PIK3C2BO00750 1634 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 SF3B1O75533 1304 aaKnown RBP eCLIP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 INSRRP14616 1297 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 CHKAP35790 457 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 CYP24A1Q07973 514 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 PDE1CQ14123 709 aaPredicted RBP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 KIZQ2M2Z5 673 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 NBPF12Q5TAG4 269 aaPredicted RBP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 RNF135Q8IUD6 432 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 PHACTR4Q8IZ21 702 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 CPA5Q8WXQ8 436 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 VPS33AQ96AX1 596 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 ZNF669Q96BR6 464 aaPredicted RBP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 SERPINB12Q96P63 405 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 WARS2Q9UGM6 360 aaKnown RBP7.42□□□□□ -1.22
CCDC171-201ENST00000380701 SOX13Q9UN79 622 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 TRAF3IP3Q9Y228 551 aa7.42□□□□□ -1.22
CCDC171-201ENST00000380701 COL1A2P08123 1366 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 FAM47DPA6NHR8 397 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 C1QTNF3-AMACRE9PGA6 284 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 F8W810 466 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 FGF10O15520 208 aaPredicted RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 ZSCAN9O15535 394 aaPredicted RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 PLA2G6O60733 806 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 CD2BP2O95400 341 aaKnown RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 GUCA1CO95843 209 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 PGK2P07205 417 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 CSH1P0DML2 217 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 CSH2P0DML3 217 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 DARSP14868 501 aaKnown RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 ZNF7P17097 686 aaPredicted RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 ADORA2AP29274 412 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 HSPA13P48723 471 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 CLCN3P51790 818 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 ANTXR2P58335 489 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 MAGOHP61326 146 aaKnown RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 MAP2K5Q13163 448 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 LLGL1Q15334 1064 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 FAM46CQ5VWP2 391 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 AGGF1Q8N302 714 aaeCLIP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 ACER1Q8TDN7 264 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 GPRC5DQ9NZD1 345 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 TM9SF1O15321 606 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 MEFVO15553 781 aaPredicted RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 MTA2O94776 668 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 KRT6AP02538 564 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 APOA1P02647 267 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 KRT6BP04259 564 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 MZF1P28698 734 aaPredicted RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 KRT6CP48668 564 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 TBX4P57082 545 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 STK4Q13043 487 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 GRM3Q14832 879 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 DACT2Q5SW24 774 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 BRSK2Q8IWQ3 736 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 FIBCD1Q8N539 461 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 SUSD6Q92537 303 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 TINF2Q9BSI4 451 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 NFKBIZQ9BYH8 718 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 CEP152O94986 1710 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 WEE2P0C1S8 567 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 MYL4P12829 197 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 PTGISQ16647 500 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 BEND6Q5SZJ8 279 aaPredicted RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 CARNMT1Q8N4J0 409 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 ICA1LQ8NDH6 482 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 C2orf49Q9BVC5 232 aaPredicted RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 E9PCH4 1651 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 A0A1W2PQ67 120 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 FAM170AA1A519 330 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 RAMP2O60895 175 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 ZMYND10O75800 440 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 CHGBP05060 677 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 UQCRBP14927 111 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 FAM133BQ5BKY9 247 aaKnown RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 LVRNQ6Q4G3 990 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 MTSS1LQ765P7 747 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 HELQQ8TDG4 1101 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 MKL1Q969V6 931 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms