RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 SH3GLB1Q9Y371 365 aa11.6□□□□□ -0.55
PTCHD1-201ENST00000379361 IGSF9BQ9UPX0 1349 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 COPZ1P61923 177 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 ARMC4Q5T2S8 1044 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 THOC7Q6I9Y2 204 aaKnown RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 NLRP14Q86W24 1093 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 ILKAPQ9H0C8 392 aaPredicted RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 PRKAB2O43741 272 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 CNOT3O75175 753 aaKnown RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 FGFR2P21802 821 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 FGFR4P22455 802 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 ZC3H11AO75152 810 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 NCAM1P13591 858 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 PTPN3P26045 913 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 SLC44A2Q8IWA5 706 aaPredicted RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 RASGEF1AQ8N9B8 481 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 VPS33BQ9H267 617 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 ELP3Q9H9T3 547 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 LBPP18428 481 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 NUP107P57740 925 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 RAD54BQ9Y620 910 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 WDR19Q8NEZ3 1342 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 PCNX2A6NKB5 2137 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 TCEA2Q15560 299 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 SRBD1Q8N5C6 995 aaKnown RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 B3GALNT2Q8NCR0 500 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 USP33Q8TEY7 942 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 NPHS2Q9NP85 383 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 APEX2Q9UBZ4 518 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 PEX5P50542 639 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 RHAGQ02094 409 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 MARK2Q7KZI7 788 aaKnown RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 GRAMD1CQ8IYS0 662 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 ARRDC4Q8NCT1 418 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 MARK1Q9P0L2 795 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 ZNF500O60304 480 aaPredicted RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 MSH3P20585 1137 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 SSTR3P32745 418 aaPredicted RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 MIIPQ5JXC2 388 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 SEPT12Q8IYM1 358 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 FAM167BQ9BTA0 163 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 PRODHO43272 600 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 GAS2O43903 313 aaKnown RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 AVILO75366 819 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 IL2P60568 153 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 LINC00301Q8NCQ3 95 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 ATP6V1G3Q96LB4 118 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 DRG1Q9Y295 367 aaKnown RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 FAM25AB3EWG3 89 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 FAM25CB3EWG5 89 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 FAM25GB3EWG6 89 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 CELF2O95319 508 aaKnown RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 GGCXP38435 758 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 GOLGA7BQ2TAP0 167 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 BPIFA3Q9BQP9 254 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 PHF2O75151 1096 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 TCN1P20061 433 aaPredicted RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 BIKQ13323 160 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 ZNF746Q6NUN9 644 aaPredicted RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 SYNE4Q8N205 404 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 TMEM143Q96AN5 459 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 STK39Q9UEW8 545 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 TNFSF13BQ9Y275 285 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 PITPNM2Q9BZ72 1349 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 PVALEFA0A1B0GWK0 134 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 SNRNP35Q16560 246 aaKnown RBP11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 TRPV3Q8NET8 790 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 ABHD10Q9NUJ1 306 aa11.59□□□□□ -0.55
PTCHD1-201ENST00000379361 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 SAMD9Q5K651 1589 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 PAX3P23760 479 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF200P98182 395 aaPredicted RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 GAS2L3Q86XJ1 694 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 AGGF1Q8N302 714 aaeCLIP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 BARHL2Q9NY43 387 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 POLG2Q9UHN1 485 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 MEI4A8MW99 385 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 HBP1O60381 514 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 HMGCS2P54868 508 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 GRM4Q14833 912 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 CHPFQ8IZ52 775 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 SGSM3Q96HU1 749 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 TDRD3Q9H7E2 651 aaKnown RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 CHORDC1Q9UHD1 332 aaPredicted RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 MSRAQ9UJ68 235 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 FBXO10Q9UK96 956 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 ADGRA3Q8IWK6 1321 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 SKAP2O75563 359 aaPredicted RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 STRIP1Q5VSL9 837 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 CD302Q8IX05 232 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 C3orf62Q6ZUJ4 267 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 RIBC1Q8N443 379 aaPredicted RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 PROX1Q92786 737 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 STIP1P31948 543 aaKnown RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 ELAVL2Q12926 359 aaKnown RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 YIPF3Q9GZM5 350 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 POLR1BQ9H9Y6 1135 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 TMEM63CQ9P1W3 806 aa11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 SERPINH1P50454 418 aaKnown RBP11.58□□□□□ -0.56
PTCHD1-201ENST00000379361 BYSLQ13895 437 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms