RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 RHOBTB2Q9BYZ6 727 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 ULBP1Q9BZM6 244 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 TMEM30AQ9NV96 361 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 CDY1Q9Y6F8 540 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 MTMR11A4FU01 709 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 EFCAB8A8MWE9 144 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 PGRMC1O00264 195 aaKnown RBP25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 KRT7P08729 469 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 FLT3P36888 993 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 DAOAP59103 153 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 YWHAZP63104 245 aaKnown RBP25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 RASIP1Q5U651 963 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 PRSS55Q6UWB4 352 aaPredicted RBP25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 ALG3Q92685 438 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 FAM149B1Q96BN6 582 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 DDX56Q9NY93 547 aaKnown RBP25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 HSFX1Q9UBD0 423 aa25.74■■□□□ 1.71
ECHDC3-201ENST00000379215 PTPRSQ13332 1948 aa25.73■■□□□ 1.71
ECHDC3-201ENST00000379215 GRAP2O75791 330 aa25.73■■□□□ 1.71
ECHDC3-201ENST00000379215 ARPP19P56211 112 aa25.73■■□□□ 1.71
ECHDC3-201ENST00000379215 KATNAL2Q8IYT4 538 aa25.73■■□□□ 1.71
ECHDC3-201ENST00000379215 CLEC4CQ8WTT0 213 aa25.73■■□□□ 1.71
ECHDC3-201ENST00000379215 KHSRPQ92945 711 aaKnown RBP eCLIP25.73■■□□□ 1.71
ECHDC3-201ENST00000379215 POPDC2Q9HBU9 364 aa25.73■■□□□ 1.71
ECHDC3-201ENST00000379215 STAP1Q9ULZ2 295 aa25.73■■□□□ 1.71
ECHDC3-201ENST00000379215 USP3Q9Y6I4 520 aa25.73■■□□□ 1.71
ECHDC3-201ENST00000379215 NLRC5Q86WI3 1866 aa25.73■■□□□ 1.71
ECHDC3-201ENST00000379215 GTF2F1P35269 517 aaKnown RBP eCLIP25.72■■□□□ 1.71
ECHDC3-201ENST00000379215 CETN2P41208 172 aa25.72■■□□□ 1.71
ECHDC3-201ENST00000379215 MATKP42679 507 aa25.72■■□□□ 1.71
ECHDC3-201ENST00000379215 RPL10AP62906 217 aaKnown RBP25.72■■□□□ 1.71
ECHDC3-201ENST00000379215 TPGS2Q68CL5 300 aa25.72■■□□□ 1.71
ECHDC3-201ENST00000379215 PM20D1Q6GTS8 502 aa25.72■■□□□ 1.71
ECHDC3-201ENST00000379215 SCN4BQ8IWT1 228 aa25.72■■□□□ 1.71
ECHDC3-201ENST00000379215 RNPC3Q96LT9 517 aaKnown RBP25.72■■□□□ 1.71
ECHDC3-201ENST00000379215 DDX23Q9BUQ8 820 aaKnown RBP25.72■■□□□ 1.71
ECHDC3-201ENST00000379215 RRN3Q9NYV6 651 aa25.72■■□□□ 1.71
ECHDC3-201ENST00000379215 PCDH10Q9P2E7 1040 aa25.72■■□□□ 1.71
ECHDC3-201ENST00000379215 PTPRDP23468 1912 aa25.72■■□□□ 1.71
ECHDC3-201ENST00000379215 LRCH4O75427 683 aa25.71■■□□□ 1.71
ECHDC3-201ENST00000379215 FGF18O76093 207 aa25.71■■□□□ 1.71
ECHDC3-201ENST00000379215 SLC5A3P53794 718 aa25.71■■□□□ 1.71
ECHDC3-201ENST00000379215 TAF5Q15542 800 aa25.71■■□□□ 1.71
ECHDC3-201ENST00000379215 BEND5Q7L4P6 421 aa25.71■■□□□ 1.71
ECHDC3-201ENST00000379215 GPRIN1Q7Z2K8 1008 aa25.71■■□□□ 1.71
ECHDC3-201ENST00000379215 VPS52Q8N1B4 723 aa25.71■■□□□ 1.71
ECHDC3-201ENST00000379215 PGLYRP2Q96PD5 576 aa25.71■■□□□ 1.71
ECHDC3-201ENST00000379215 FBXO44Q9H4M3 255 aa25.71■■□□□ 1.71
ECHDC3-201ENST00000379215 MRPL17Q9NRX2 175 aaKnown RBP25.71■■□□□ 1.71
ECHDC3-201ENST00000379215 COMMD8Q9NX08 183 aa25.71■■□□□ 1.71
ECHDC3-201ENST00000379215 MAFFQ9ULX9 164 aa25.71■■□□□ 1.71
ECHDC3-201ENST00000379215 MKI67P46013 3256 aaKnown RBP25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 NOS2P35228 1153 aa25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 MARCKSL1P49006 195 aa25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 NDUFV1P49821 464 aa25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 TAS2R40P59535 323 aa25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 ROR1Q01973 937 aa25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 CCDC14Q49A88 953 aa25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 ODF2Q5BJF6 829 aa25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 DCAF12L1Q5VU92 463 aa25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 RSPO2Q6UXX9 243 aaPredicted RBP25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 CPNE8Q86YQ8 564 aa25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 EXD1Q8NHP7 514 aa25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 RBM41Q96IZ5 413 aaKnown RBP25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 SLC2A13Q96QE2 648 aa25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 AFF4Q9UHB7 1163 aaKnown RBP25.7■■□□□ 1.71
ECHDC3-201ENST00000379215 TNFRSF10BO14763 440 aa25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 TADA3O75528 432 aa25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 USP17L7P0C7H9 530 aa25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 LINC00271P0C7V0 271 aa25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 HAPLN1P10915 354 aaPredicted RBP25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 OR1D2P34982 312 aa25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 TUFMP49411 452 aaKnown RBP25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 RNF19BQ6ZMZ0 732 aa25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 STRADAQ7RTN6 431 aa25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 NUP93Q8N1F7 819 aa25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 ATAD1Q8NBU5 361 aa25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 SPATA17Q96L03 361 aa25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 FNIP2Q9P278 1114 aa25.7■■□□□ 1.7
ECHDC3-201ENST00000379215 CCDC85CA6NKD9 419 aa25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 CAPN9O14815 690 aa25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 RTN3O95197 1032 aaPredicted RBP25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 ZRANB2O95218 330 aaKnown RBP eCLIP25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 LTFP02788 710 aa25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 CDR1P51861 262 aa25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 SLC25A11Q02978 314 aaKnown RBP25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 SLC25A52Q3SY17 297 aa25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 MGAT5BQ3V5L5 792 aa25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 TRNP1Q6NT89 227 aa25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 MS4A14Q96JA4 679 aa25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 CFAP57Q96MR6 1250 aa25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 TMEM51Q9NW97 253 aa25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 LZTS1Q9Y250 596 aa25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 PATJQ8NI35 1801 aa25.69■■□□□ 1.7
ECHDC3-201ENST00000379215 WDR27A2RRH5 827 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 PDE2AO00408 941 aaPredicted RBP25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 C2CD2LO14523 706 aa25.68■■□□□ 1.7
ECHDC3-201ENST00000379215 CTIFO43310 598 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms