RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 INTS6LQ5JSJ4 861 aaKnown RBP18.18■□□□□ 0.5
THUMPD2-201ENST00000378727 SLC39A5Q6ZMH5 540 aa18.18■□□□□ 0.5
THUMPD2-201ENST00000378727 HSPH1Q92598 858 aa18.18■□□□□ 0.5
THUMPD2-201ENST00000378727 SEPT8Q92599 483 aa18.18■□□□□ 0.5
THUMPD2-201ENST00000378727 SCLYQ96I15 445 aa18.18■□□□□ 0.5
THUMPD2-201ENST00000378727 TMEM209Q96SK2 561 aa18.18■□□□□ 0.5
THUMPD2-201ENST00000378727 KCNK16Q96T55 309 aa18.18■□□□□ 0.5
THUMPD2-201ENST00000378727 RHOBTB2Q9BYZ6 727 aa18.18■□□□□ 0.5
THUMPD2-201ENST00000378727 CRISPLD2Q9H0B8 497 aa18.18■□□□□ 0.5
THUMPD2-201ENST00000378727 HOMER3Q9NSC5 361 aa18.18■□□□□ 0.5
THUMPD2-201ENST00000378727 GRHL1Q9NZI5 618 aa18.18■□□□□ 0.5
THUMPD2-201ENST00000378727 TTC3P53804 2025 aa18.17■□□□□ 0.5
THUMPD2-201ENST00000378727 AP1G2O75843 785 aa18.17■□□□□ 0.5
THUMPD2-201ENST00000378727 PTPN9P43378 593 aa18.17■□□□□ 0.5
THUMPD2-201ENST00000378727 RPL21P46778 160 aaKnown RBP18.17■□□□□ 0.5
THUMPD2-201ENST00000378727 HDAC4P56524 1084 aa18.17■□□□□ 0.5
THUMPD2-201ENST00000378727 OVOS1Q6IE37 1185 aa18.17■□□□□ 0.5
THUMPD2-201ENST00000378727 MYLPFQ96A32 169 aa18.17■□□□□ 0.5
THUMPD2-201ENST00000378727 ZDHHC18Q9NUE0 388 aa18.17■□□□□ 0.5
THUMPD2-201ENST00000378727 TMLHEQ9NVH6 421 aa18.17■□□□□ 0.5
THUMPD2-201ENST00000378727 KANSL3Q9P2N6 904 aa18.17■□□□□ 0.5
THUMPD2-201ENST00000378727 TYMPP19971 482 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 GATMP50440 423 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 ARSEP51690 589 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 CBX1P83916 185 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 KRT17Q04695 432 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 FAAP100Q0VG06 881 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 ZDHHC24Q6UX98 284 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 LRRTM3Q86VH5 581 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 MREGQ8N565 214 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 KCTD6Q8NC69 237 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 CENPIQ92674 756 aaPredicted RBP18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 DDX23Q9BUQ8 820 aaKnown RBP18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 PCDHB8Q9UN66 801 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 EFR3BQ9Y2G0 817 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 NLRC5Q86WI3 1866 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 PTPRDP23468 1912 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 HHLA1C9JL84 531 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 H3BQF6 201 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 TMEM189-UBE2V1I3L0A0 370 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 PRPSAP2O60256 369 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 ENDOD1O94919 500 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 CCL23P55773 120 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 MRPS5P82675 430 aaKnown RBP18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 RNASELQ05823 741 aaKnown RBP18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 EFHC1Q5JVL4 640 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 GPRIN1Q7Z2K8 1008 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 CRIPAKQ8N1N5 446 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 ATL2Q8NHH9 583 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 HIPK3Q9H422 1215 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 LRRC4Q9HBW1 653 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 NEU2Q9Y3R4 380 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 PCDHB7Q9Y5E2 793 aa18.16■□□□□ 0.5
THUMPD2-201ENST00000378727 LIASO43766 372 aa18.15■□□□□ 0.5
THUMPD2-201ENST00000378727 OR1G1P47890 313 aa18.15■□□□□ 0.5
THUMPD2-201ENST00000378727 TKTL1P51854 596 aa18.15■□□□□ 0.5
THUMPD2-201ENST00000378727 PPP1R7Q15435 360 aa18.15■□□□□ 0.5
THUMPD2-201ENST00000378727 TRIM60Q495X7 471 aa18.15■□□□□ 0.5
THUMPD2-201ENST00000378727 RAB41Q5JT25 222 aa18.15■□□□□ 0.5
THUMPD2-201ENST00000378727 APBB2Q92870 758 aa18.15■□□□□ 0.5
THUMPD2-201ENST00000378727 SMARCD1Q96GM5 515 aa18.15■□□□□ 0.5
THUMPD2-201ENST00000378727 CASD1Q96PB1 797 aa18.15■□□□□ 0.5
THUMPD2-201ENST00000378727 CALCOCO1Q9P1Z2 691 aa18.15■□□□□ 0.5
THUMPD2-201ENST00000378727 DNPEPQ9ULA0 475 aa18.15■□□□□ 0.5
THUMPD2-201ENST00000378727 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 HSF2BPO75031 334 aa18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 CXCL10P02778 98 aa18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 HSPA9P38646 679 aaKnown RBP18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 ATXN1P54253 815 aaKnown RBP18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 TLE2Q04725 743 aa18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 SCYL2Q6P3W7 929 aa18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 DRICH1Q6PGQ1 229 aaPredicted RBP18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 BBS12Q6ZW61 710 aa18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 DEFB106AQ8N104 65 aa18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 SIX6OS1Q8N1H7 587 aa18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 DIS3LQ8TF46 1054 aaKnown RBP18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 HAUS1Q96CS2 278 aa18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 PPP1R12CQ9BZL4 782 aa18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 CSNK1G1Q9HCP0 422 aa18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 PRG3Q9Y2Y8 225 aaPredicted RBP18.14■□□□□ 0.5
THUMPD2-201ENST00000378727 AGPSO00116 658 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 NRP1O14786 923 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 CST8O60676 142 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 MATKP42679 507 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 YWHAHQ04917 246 aaPredicted RBP18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 MMRN1Q13201 1228 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 PTK6Q13882 451 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 SYDE1Q6ZW31 735 aaPredicted RBP18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 FBXO25Q8TCJ0 367 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 GRK7Q8WTQ7 553 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 FAM149B1Q96BN6 582 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 CCDC114Q96M63 670 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 FAM193BQ96PV7 902 aaPredicted RBP18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 TBCBQ99426 244 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 CALN1Q9BXU9 219 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 ULBP1Q9BZM6 244 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 NRDE2Q9H7Z3 1164 aa18.14■□□□□ 0.49
THUMPD2-201ENST00000378727 GPATCH2LQ9NWQ4 482 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms