RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 STIP1P31948 543 aaKnown RBP11.41□□□□□ -0.58
BEST1-201ENST00000378043 BAG6P46379 1132 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 DARS2Q6PI48 645 aaKnown RBP11.41□□□□□ -0.58
BEST1-201ENST00000378043 DPH6Q7L8W6 267 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 PRPF39Q86UA1 669 aaKnown RBP11.41□□□□□ -0.58
BEST1-201ENST00000378043 MTDHQ86UE4 582 aaKnown RBP11.41□□□□□ -0.58
BEST1-201ENST00000378043 FAM13CQ8NE31 585 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 SLC44A1Q8WWI5 657 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 HEXIM2Q96MH2 286 aaKnown RBP11.41□□□□□ -0.58
BEST1-201ENST00000378043 PPP1R16BQ96T49 567 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 PLAC1Q9HBJ0 212 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 PDGFCQ9NRA1 345 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 ASNSD1Q9NWL6 643 aa11.41□□□□□ -0.58
BEST1-201ENST00000378043 TRAFD1O14545 582 aaPredicted RBP11.4□□□□□ -0.58
BEST1-201ENST00000378043 VDRP11473 427 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 PDGFRAP16234 1089 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 GCLCP48506 637 aaPredicted RBP11.4□□□□□ -0.58
BEST1-201ENST00000378043 NEK3P51956 506 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 ATP11AP98196 1134 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 ROR1Q01973 937 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 FAAP100Q0VG06 881 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 PTK7Q13308 1070 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 FAM183BPQ6ZVS7 135 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 ILDR2Q71H61 639 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 CLNKQ7Z7G1 428 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 LRRC6Q86X45 466 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 C12orf29Q8N999 325 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 ALKBH8Q96BT7 664 aaKnown RBP11.4□□□□□ -0.58
BEST1-201ENST00000378043 HPDLQ96IR7 371 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 CPB2Q96IY4 423 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 ZNF570Q96NI8 536 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 RNF157Q96PX1 679 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 RAB3IPQ96QF0 476 aaPredicted RBP11.4□□□□□ -0.58
BEST1-201ENST00000378043 NFKBIZQ9BYH8 718 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 SMARCAD1Q9H4L7 1026 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 PDZD7Q9H5P4 517 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 MANSC1Q9H8J5 431 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 DCTN4Q9UJW0 460 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 A0A087WZ62 844 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 HBP1O60381 514 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 WFS1O76024 890 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 GPD1P21695 349 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 EPHB2P29323 1055 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 NDST1P52848 882 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 SLC18A2Q05940 514 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 INCA1Q0VD86 236 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 CDO1Q16878 200 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 SPDYAQ5MJ70 313 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 C1orf228Q6PIY5 440 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 PQLC3Q8N755 202 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 PLD5Q8N7P1 536 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 ZNF398Q8TD17 642 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 FDXACB1Q9BRP7 624 aaPredicted RBP11.4□□□□□ -0.58
BEST1-201ENST00000378043 KCNK13Q9HB14 408 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 CYP3A43Q9HB55 503 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 PRMT7Q9NVM4 692 aaPredicted RBP11.4□□□□□ -0.58
BEST1-201ENST00000378043 RBPJLQ9UBG7 517 aa11.4□□□□□ -0.58
BEST1-201ENST00000378043 PEX11AO75192 247 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 FAM155BO75949 473 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 MT-ND3P03897 115 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 ARF4P18085 180 aaPredicted RBP11.39□□□□□ -0.59
BEST1-201ENST00000378043 ATICP31939 592 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 GBP2P32456 591 aaPredicted RBP11.39□□□□□ -0.59
BEST1-201ENST00000378043 SLC26A2P50443 739 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 IGBP1P78318 339 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 ZNF200P98182 395 aaPredicted RBP11.39□□□□□ -0.59
BEST1-201ENST00000378043 CBLBQ13191 982 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 FAM187BQ17R55 369 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 KIRREL3Q8IZU9 778 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 LRRN4Q8WUT4 740 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 KHSRPQ92945 711 aaKnown RBP eCLIP11.39□□□□□ -0.59
BEST1-201ENST00000378043 GPATCH2LQ9NWQ4 482 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 CNTN3Q9P232 1028 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 ZFP69BQ9UJL9 534 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 TSPAN16Q9UKR8 245 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 BARX2Q9UMQ3 279 aaPredicted RBP11.39□□□□□ -0.59
BEST1-201ENST00000378043 A0A0G2JLL6 359 aaPredicted RBP11.39□□□□□ -0.59
BEST1-201ENST00000378043 CHADO15335 359 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 LPXNO60711 386 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 GABBR2O75899 941 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 MAP3K6O95382 1288 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 TXNP10599 105 aaKnown RBP11.39□□□□□ -0.59
BEST1-201ENST00000378043 MCF2P10911 925 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 PYGBP11216 843 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 YWHAZP63104 245 aaKnown RBP11.39□□□□□ -0.59
BEST1-201ENST00000378043 CCDC14Q49A88 953 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 GJC2Q5T442 439 aaPredicted RBP11.39□□□□□ -0.59
BEST1-201ENST00000378043 OR6B2Q6IFH4 312 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 LCLAT1Q6UWP7 414 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 CDHR3Q6ZTQ4 885 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 PRRT2Q7Z6L0 340 aaPredicted RBP11.39□□□□□ -0.59
BEST1-201ENST00000378043 FAM111AQ96PZ2 611 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 MIPEPQ99797 713 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 CXCL16Q9H2A7 254 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 ASB7Q9H672 318 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 GBA2Q9HCG7 927 aaPredicted RBP11.39□□□□□ -0.59
BEST1-201ENST00000378043 RAB6BQ9NRW1 208 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 SLC5A4Q9NY91 659 aa11.39□□□□□ -0.59
BEST1-201ENST00000378043 PLXNA1Q9UIW2 1896 aa11.38□□□□□ -0.59
BEST1-201ENST00000378043 CXorf49A8MYA2 514 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms