RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 OR1G1P47890 313 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 TIMM50Q3ZCQ8 353 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 ALKBH2Q6NS38 261 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 COLGALT2Q8IYK4 626 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 SVOPQ8N4V2 548 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 SPPL2AQ8TCT8 520 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 RAVER2Q9HCJ3 691 aaKnown RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 RHBDL2Q9NX52 303 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 PIM2Q9P1W9 311 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 USP15Q9Y4E8 981 aaPredicted RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 PCDHA10Q9Y5I2 948 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 MYO3BQ8WXR4 1341 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 LOC102724428A0A0B4J2F2 783 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 H3BN98 237 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 ZBTB39O15060 712 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 MAGEB2O15479 319 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 RPS6KA5O75582 802 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 LDOC1O95751 146 aaPredicted RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 FCGR1AP12314 374 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 ACADSP16219 412 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 STARP49675 285 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 SIK1P57059 783 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 PFKFB3Q16875 520 aaPredicted RBP10.98□□□□□ -0.65
RTN3-206ENST00000377819 EFHC1Q5JVL4 640 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 RASSF5Q8WWW0 418 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 APOL4Q9BPW4 351 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 COA1Q9GZY4 146 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 PSME2Q9UL46 239 aa10.98□□□□□ -0.65
RTN3-206ENST00000377819 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.98□□□□□ -0.65
RTN3-206ENST00000377819 TXNP10599 105 aaKnown RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 ITGA4P13612 1032 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 HALP42357 657 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 CLK3P49761 638 aaKnown RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 AGMOQ6ZNB7 445 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 E2F7Q96AV8 911 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 SGF29Q96ES7 293 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 GLT1D1Q96MS3 346 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 RPRD1AQ96P16 312 aaPredicted RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 GOLPH3Q9H4A6 298 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 TM9SF1O15321 606 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 ATG7O95352 703 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 NR3C2P08235 984 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 MYBL2P10244 700 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 GJA1P17302 382 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 ITIH2P19823 946 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 CES1P23141 567 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 CCND1P24385 295 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 COPAP53621 1224 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 SGCGQ13326 291 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 TSNQ15631 228 aaKnown RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 DDR2Q16832 855 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 EIF2S3LQ2VIR3 472 aaKnown RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 USP41Q3LFD5 358 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 TDRD10Q5VZ19 366 aaKnown RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 GRAMD1CQ8IYS0 662 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 RBBP8NLQ8NC74 664 aaPredicted RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 LINC00301Q8NCQ3 95 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 ZNF248Q8NDW4 579 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 UBASH3BQ8TF42 649 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 STK39Q9UEW8 545 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 PYCARDQ9ULZ3 195 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 IRAK3Q9Y616 596 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 ABCB11O95342 1321 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 PITPNM2Q9BZ72 1349 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 LGALS16A8MUM7 142 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 CTSHP09668 335 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 THRAP10827 490 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 S100A1P23297 94 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 GGCXP38435 758 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 RAB25P57735 213 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 VAC14Q08AM6 782 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 EPS8Q12929 822 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 RESTQ13127 1097 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 ACAP2Q15057 778 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 FUT11Q495W5 492 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 GPRASP2Q96D09 838 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 ERP27Q96DN0 273 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 MAML3Q96JK9 1138 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 ZCCHC2Q9C0B9 1178 aaKnown RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 IL1RAPL1Q9NZN1 696 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 RCOR1Q9UKL0 485 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 RIMS1Q86UR5 1692 aaKnown RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 NEXMIFQ5QGS0 1516 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 MYL12BO14950 172 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 SKAP2O75563 359 aaPredicted RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 PRKCBP05771 671 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 RXRGP48443 463 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 ALDH9A1P49189 494 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 OTUD4Q01804 1114 aaKnown RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 DMTNQ08495 405 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 TRAF2Q12933 501 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 PIGHQ14442 188 aaPredicted RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 ARID5BQ14865 1188 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 ZCWPW2Q504Y3 356 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 USP7Q93009 1102 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 IL17RAQ96F46 866 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 PAGE5Q96GU1 130 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 KCNS3Q9BQ31 491 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 COLEC11Q9BWP8 271 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 CIPCQ9C0C6 399 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms