RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 RPL6Q02878 288 aaKnown RBP11.72□□□□□ -0.53
DDX39B-201ENST00000376177 ZNF268Q14587 947 aaPredicted RBP11.72□□□□□ -0.53
DDX39B-201ENST00000376177 RESP18Q5W5W9 173 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 TOGARAM2Q6ZUX3 1019 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 VSTM4Q8IW00 320 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 ARL14EPQ8N8R7 260 aaPredicted RBP11.72□□□□□ -0.53
DDX39B-201ENST00000376177 SH3RF2Q8TEC5 729 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 UBXN4Q92575 508 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 SPACA7Q96KW9 195 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 DCBLD2Q96PD2 775 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 PI4K2AQ9BTU6 479 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 RUSC1Q9BVN2 902 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 TSPYL1Q9H0U9 437 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 POLMQ9NP87 494 aaPredicted RBP11.72□□□□□ -0.53
DDX39B-201ENST00000376177 KMT5AQ9NQR1 393 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 TOR4AQ9NXH8 423 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 COL12A1Q99715 3063 aa11.72□□□□□ -0.53
DDX39B-201ENST00000376177 USP27XA6NNY8 438 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 CBFA2T3O75081 653 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 SLFN14P0C7P3 912 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 ODC1P11926 461 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 UBASH3AP57075 661 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 ZNF33AQ06730 810 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 GNL2Q13823 731 aaKnown RBP11.71□□□□□ -0.53
DDX39B-201ENST00000376177 SAFBQ15424 915 aaKnown RBP eCLIP11.71□□□□□ -0.53
DDX39B-201ENST00000376177 DDR2Q16832 855 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 FBXO38Q6PIJ6 1188 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 TMCO3Q6UWJ1 677 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 PGBD3Q8N328 593 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 ZNF843Q8N446 348 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 MLKLQ8NB16 471 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 MNS1Q8NEH6 495 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 MRPS31Q92665 395 aaKnown RBP11.71□□□□□ -0.53
DDX39B-201ENST00000376177 UBL7Q96S82 380 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-201ENST00000376177 NAA15Q9BXJ9 866 aaKnown RBP11.71□□□□□ -0.53
DDX39B-201ENST00000376177 IL21RQ9HBE5 538 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 PCDHB9Q9Y5E1 797 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 RAI2Q9Y5P3 530 aa11.71□□□□□ -0.53
DDX39B-201ENST00000376177 A0A087WV48 116 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 TRABD2BA6NFA1 517 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 ALDH1A2O94788 518 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 BMP15O95972 392 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 SERPINC1P01008 464 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 CYP17A1P05093 508 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 CKMP06732 381 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 DDX6P26196 483 aaKnown RBP eCLIP11.7□□□□□ -0.54
DDX39B-201ENST00000376177 MAOBP27338 520 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 KIR2DL1P43626 348 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-201ENST00000376177 KDSRQ06136 332 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 ENOX2Q16206 610 aaKnown RBP11.7□□□□□ -0.54
DDX39B-201ENST00000376177 GCNT4Q9P109 453 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 HCN2Q9UL51 889 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 UBQLN1Q9UMX0 589 aaKnown RBP11.7□□□□□ -0.54
DDX39B-201ENST00000376177 KIAA1024Q9UPX6 916 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 CLIC4Q9Y696 253 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 GOLGA8CPA6NN73 597 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 E9PMD0 336 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 FAM189A1O60320 539 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 TOM1L1O75674 476 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 CYP11A1P05108 521 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 NFICP08651 508 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 ATXN1LP0C7T5 689 aaKnown RBP11.7□□□□□ -0.54
DDX39B-201ENST00000376177 GABRG2P18507 467 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 CYP3A5P20815 502 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 MRPS21P82921 87 aaKnown RBP11.7□□□□□ -0.54
DDX39B-201ENST00000376177 MCL1Q07820 350 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 RAD51AP2Q09MP3 1159 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 GPS2Q13227 327 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 PLEKHG6Q3KR16 790 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 RILPL1Q5EBL4 403 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 C9orf57Q5W0N0 161 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 WSCD1Q658N2 575 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 JADE1Q6IE81 842 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 TMPRSS7Q7RTY8 843 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 CEP76Q8TAP6 659 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 EXOC4Q96A65 974 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 HSPA12BQ96MM6 686 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 PYM1Q9BRP8 204 aaKnown RBP11.7□□□□□ -0.54
DDX39B-201ENST00000376177 SLC6A17Q9H1V8 727 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 TRMT1Q9NXH9 659 aaKnown RBP11.7□□□□□ -0.54
DDX39B-201ENST00000376177 DKK4Q9UBT3 224 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 PCOLCE2Q9UKZ9 415 aa11.7□□□□□ -0.54
DDX39B-201ENST00000376177 TP53BP1Q12888 1972 aaPredicted RBP11.69□□□□□ -0.54
DDX39B-201ENST00000376177 TRAV19A0A0A6YYK7 116 aa11.69□□□□□ -0.54
DDX39B-201ENST00000376177 IGHV1OR15-9A0A0B4J2B8 117 aa11.69□□□□□ -0.54
DDX39B-201ENST00000376177 ATXN7O15265 892 aaPredicted RBP11.69□□□□□ -0.54
DDX39B-201ENST00000376177 XBP1P17861 261 aa11.69□□□□□ -0.54
DDX39B-201ENST00000376177 CYP2F1P24903 491 aa11.69□□□□□ -0.54
DDX39B-201ENST00000376177 ERCC5P28715 1186 aaPredicted RBP11.69□□□□□ -0.54
DDX39B-201ENST00000376177 HOXD12P35452 270 aa11.69□□□□□ -0.54
DDX39B-201ENST00000376177 CCT6AP40227 531 aaKnown RBP11.69□□□□□ -0.54
DDX39B-201ENST00000376177 WASP42768 502 aa11.69□□□□□ -0.54
DDX39B-201ENST00000376177 MATR3P43243 847 aaKnown RBP eCLIP11.69□□□□□ -0.54
DDX39B-201ENST00000376177 PPP2R3AQ06190 1150 aa11.69□□□□□ -0.54
DDX39B-201ENST00000376177 GRIK2Q13002 908 aa11.69□□□□□ -0.54
DDX39B-201ENST00000376177 HNRNPDQ14103 355 aaKnown RBP11.69□□□□□ -0.54
DDX39B-201ENST00000376177 SPDYCQ5MJ68 293 aa11.69□□□□□ -0.54
DDX39B-201ENST00000376177 SPATA1Q5VX52 437 aa11.69□□□□□ -0.54
DDX39B-201ENST00000376177 SCARA3Q6AZY7 606 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms