RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SURF1Q15526 300 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 STX1AQ16623 288 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 DDR2Q16832 855 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 CT47A1Q5JQC4 288 aaPredicted RBP12.95□□□□□ -0.34
LSM2-208ENST00000375661 C1orf220Q5T0J3 134 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 SH3PXD2AQ5TCZ1 1133 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 LMBRD2Q68DH5 695 aaPredicted RBP12.95□□□□□ -0.34
LSM2-208ENST00000375661 SCARA3Q6AZY7 606 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 C11orf57Q6ZUT1 292 aaPredicted RBP12.95□□□□□ -0.34
LSM2-208ENST00000375661 CYP2U1Q7Z449 544 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 FAM186BQ8IYM0 893 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 PDCL2Q8N4E4 241 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 LRRC52Q8N7C0 313 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 OR5B17Q8NGF7 314 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 PARD3BQ8TEW8 1205 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 USP33Q8TEY7 942 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 CACTINQ8WUQ7 758 aaKnown RBP12.95□□□□□ -0.34
LSM2-208ENST00000375661 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 CCDC127Q96BQ5 260 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 TMEM121BQ9BXQ6 578 aaPredicted RBP12.95□□□□□ -0.34
LSM2-208ENST00000375661 ADAM33Q9BZ11 813 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 INTS13Q9NVM9 706 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 POLR3BQ9NW08 1133 aaPredicted RBP12.95□□□□□ -0.34
LSM2-208ENST00000375661 ANO10Q9NW15 660 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 DDX43Q9NXZ2 648 aaKnown RBP12.95□□□□□ -0.34
LSM2-208ENST00000375661 GCNT4Q9P109 453 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 EVLQ9UI08 416 aaPredicted RBP12.95□□□□□ -0.34
LSM2-208ENST00000375661 DACH1Q9UI36 760 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 FRMD4BQ9Y2L6 1034 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 WNT6Q9Y6F9 365 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 PI4KAP42356 2102 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 LRRIQ3A6PVS8 624 aaPredicted RBP12.94□□□□□ -0.34
LSM2-208ENST00000375661 TULP1O00294 542 aaPredicted RBP12.94□□□□□ -0.34
LSM2-208ENST00000375661 GIPC1O14908 333 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 SLC16A3O15427 465 aaKnown RBP12.94□□□□□ -0.34
LSM2-208ENST00000375661 CYP2F1P24903 491 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 PSMC2P35998 433 aaKnown RBP12.94□□□□□ -0.34
LSM2-208ENST00000375661 DPP6P42658 865 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 MAGEA11P43364 429 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 LHX1P48742 406 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 CDR1P51861 262 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 DLG4P78352 724 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 CLDN10P78369 228 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 MRPS21P82921 87 aaKnown RBP12.94□□□□□ -0.34
LSM2-208ENST00000375661 LMAN2Q12907 356 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 FOXC1Q12948 553 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 HSF5Q4G112 596 aaPredicted RBP12.94□□□□□ -0.34
LSM2-208ENST00000375661 NAIF1Q69YI7 327 aaPredicted RBP12.94□□□□□ -0.34
LSM2-208ENST00000375661 FILIP1Q7Z7B0 1213 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 WDR49Q8IV35 697 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 CSGALNACT2Q8N6G5 542 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 CXorf38Q8TB03 319 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 TMC2Q8TDI7 906 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 CEP63Q96MT8 703 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 PKMYT1Q99640 499 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 CGRRF1Q99675 332 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 SRRTQ9BXP5 876 aaKnown RBP12.94□□□□□ -0.34
LSM2-208ENST00000375661 TRPC7Q9HCX4 862 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 GDAP2Q9NXN4 497 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 MMP17Q9ULZ9 603 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 L1RE1Q9UN81 338 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 ARHGAP26Q9UNA1 814 aa12.94□□□□□ -0.34
LSM2-208ENST00000375661 K7EQS6 105 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 CDX4O14627 284 aaPredicted RBP12.93□□□□□ -0.34
LSM2-208ENST00000375661 ALDH1A2O94788 518 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 DLATP10515 647 aaKnown RBP12.93□□□□□ -0.34
LSM2-208ENST00000375661 HDCP19113 662 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 PCSK1P29120 753 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 TFAMQ00059 246 aaKnown RBP12.93□□□□□ -0.34
LSM2-208ENST00000375661 SDHAF4Q5VUM1 108 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 INTS8Q75QN2 995 aaKnown RBP12.93□□□□□ -0.34
LSM2-208ENST00000375661 DPH6Q7L8W6 267 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 SPATA2LQ8IUW3 424 aaPredicted RBP12.93□□□□□ -0.34
LSM2-208ENST00000375661 TOP6BLQ8N6T0 577 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 ARL14EPQ8N8R7 260 aaPredicted RBP12.93□□□□□ -0.34
LSM2-208ENST00000375661 C1orf127Q8N9H9 656 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 STKLD1Q8NE28 680 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 ENOX1Q8TC92 643 aaKnown RBP12.93□□□□□ -0.34
LSM2-208ENST00000375661 SH3RF2Q8TEC5 729 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 FNBP1Q96RU3 617 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 SLC22A12Q96S37 553 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 CYP2S1Q96SQ9 504 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 MTMR12Q9C0I1 747 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 EHD2Q9NZN4 543 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 SIX4Q9UIU6 781 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 GTF3C4Q9UKN8 822 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 ITGA11Q9UKX5 1188 aa12.93□□□□□ -0.34
LSM2-208ENST00000375661 ASCC3Q8N3C0 2202 aaKnown RBP12.92□□□□□ -0.34
LSM2-208ENST00000375661 GABRDO14764 452 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 ITGB3P05106 788 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 TRIM49P0CI25 452 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 TRIM49CP0CI26 452 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 EPB41P11171 864 aaKnown RBP12.92□□□□□ -0.34
LSM2-208ENST00000375661 TNNI1P19237 187 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 LAMA1P25391 3075 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 POLR2BP30876 1174 aaKnown RBP12.92□□□□□ -0.34
LSM2-208ENST00000375661 OPRD1P41143 372 aa12.92□□□□□ -0.34
LSM2-208ENST00000375661 EIF2DP41214 584 aaKnown RBP12.92□□□□□ -0.34
LSM2-208ENST00000375661 PPP3CCP48454 512 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms