RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 CEP350Q5VT06 3117 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 F8W810 466 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 INPPL1O15357 1258 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 AP1G2O75843 785 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 ITGB1P05556 798 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 TFE3P19532 575 aaPredicted RBP17.67■□□□□ 0.42
PTPN20-203ENST00000374342 PTPN9P43378 593 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 CDH6P55285 790 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 MTMR3Q13615 1198 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 BYSLQ13895 437 aaKnown RBP17.67■□□□□ 0.42
PTPN20-203ENST00000374342 TAZQ16635 292 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 CD300LGQ6UXG3 332 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 SIX6OS1Q8N1H7 587 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 GOLGA6L1Q8N7Z2 621 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 CMASQ8NFW8 434 aaPredicted RBP17.67■□□□□ 0.42
PTPN20-203ENST00000374342 URGCPQ8TCY9 931 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 FAM149B1Q96BN6 582 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 SNF8Q96H20 258 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 LRRC4Q9HBW1 653 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 GPATCH2LQ9NWQ4 482 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 MTRF1LQ9UGC7 380 aaKnown RBP17.67■□□□□ 0.42
PTPN20-203ENST00000374342 PLAAQ9Y263 795 aa17.67■□□□□ 0.42
PTPN20-203ENST00000374342 B4GALT3O60512 393 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 CST8O60676 142 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 EOMESO95936 686 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 RABGGTBP53611 331 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 BFSP2Q13515 415 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 KRT81Q14533 505 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 MTFR1Q15390 333 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 BBS12Q6ZW61 710 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 MYCBPAPQ8TBZ2 947 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 RSPH1Q8WYR4 309 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 NDRG1Q92597 394 aaKnown RBP17.66■□□□□ 0.42
PTPN20-203ENST00000374342 MYLPFQ96A32 169 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 RTP3Q9BQQ7 232 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 WHRNQ9P202 907 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 ZNF148Q9UQR1 794 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 EFR3BQ9Y2G0 817 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 ATP8A1Q9Y2Q0 1164 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 OPA1O60313 960 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 CAPN15O75808 1086 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 CDK7P50613 346 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 GYS2P54840 703 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 VCPP55072 806 aaKnown RBP17.66■□□□□ 0.42
PTPN20-203ENST00000374342 ADCY1Q08828 1119 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 MMRN1Q13201 1228 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 NOMO2Q5JPE7 1267 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 EFHC1Q5JVL4 640 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 DRICH1Q6PGQ1 229 aaPredicted RBP17.66■□□□□ 0.42
PTPN20-203ENST00000374342 KCTD13Q8WZ19 329 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 ART4Q93070 314 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 SNRNP25Q9BV90 132 aaKnown RBP17.66■□□□□ 0.42
PTPN20-203ENST00000374342 FTHL17Q9BXU8 183 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 RHOBTB2Q9BYZ6 727 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 PAK6Q9NQU5 681 aaPredicted RBP17.66■□□□□ 0.42
PTPN20-203ENST00000374342 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.66■□□□□ 0.42
PTPN20-203ENST00000374342 DSEQ9UL01 958 aa17.66■□□□□ 0.42
PTPN20-203ENST00000374342 M0QZQ0 153 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 NBNO60934 754 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 PPFIA2O75334 1257 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 DAB1O75553 588 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 KRT14P02533 472 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 CYP11A1P05108 521 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 HDAC4P56524 1084 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 OTUD4Q01804 1114 aaKnown RBP17.65■□□□□ 0.42
PTPN20-203ENST00000374342 LMNB2Q03252 620 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 DPYSL3Q14195 570 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 ZC3H12AQ5D1E8 599 aaKnown RBP17.65■□□□□ 0.42
PTPN20-203ENST00000374342 DCLRE1AQ6PJP8 1040 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 PRUNE1Q86TP1 453 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 ZNF280BQ86YH2 543 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 IQCKQ8N0W5 287 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 SPATA18Q8TC71 538 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 ACTL9Q8TC94 416 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 SMOQ99835 787 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 SH3GL2Q99962 352 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 ADAM33Q9BZ11 813 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 FAM129AQ9BZQ8 928 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 SAE1Q9UBE0 346 aaPredicted RBP17.65■□□□□ 0.42
PTPN20-203ENST00000374342 NEU2Q9Y3R4 380 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 MYO16Q9Y6X6 1858 aa17.65■□□□□ 0.42
PTPN20-203ENST00000374342 PQBP1O60828 265 aaKnown RBP17.64■□□□□ 0.42
PTPN20-203ENST00000374342 DDHD2O94830 711 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 ADCY8P40145 1251 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 NDUFV1P49821 464 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 SULT1E1P49888 294 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 TKTL1P51854 596 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 CACNA2D1P54289 1103 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 GABPB1Q06547 395 aaPredicted RBP17.64■□□□□ 0.42
PTPN20-203ENST00000374342 INTS6LQ5JSJ4 861 aaKnown RBP17.64■□□□□ 0.42
PTPN20-203ENST00000374342 OVOS1Q6IE37 1185 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 ARCQ7LC44 396 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 CCDC89Q8N998 374 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 TEKT4Q8WW24 435 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 SMARCD1Q96GM5 515 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 SUSD3Q96L08 255 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 TBCBQ99426 244 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 NCAPGQ9BPX3 1015 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 BEGAINQ9BUH8 593 aa17.64■□□□□ 0.42
PTPN20-203ENST00000374342 TXLNGYQ9BZA5 131 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms