RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 HESX1Q9UBX0 185 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 SLC15A5A6NIM6 579 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 H7C0C1 242 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 HGSO14964 777 aaPredicted RBP16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 ZNF865P0CJ78 1059 aaPredicted RBP16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 ATP5OP48047 213 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 HUNKP57058 714 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 PKN2Q16513 984 aaKnown RBP16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 CST9Q5W186 159 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 PPM1EQ8WY54 764 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 P3H4Q92791 437 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 FAXDC2Q96IV6 333 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 CLUHO75153 1309 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 MEIS3P2A8K0S8 358 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 AVILO75366 819 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 KRT15P19012 456 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 SDC4P31431 198 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 PCK1P35558 622 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 PSEN2P49810 448 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 MAP2K5Q13163 448 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 PKDCCQ504Y2 493 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 FBXO47Q5MNV8 452 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 RELL1Q8IUW5 271 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 TTC13Q8NBP0 860 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 SLC35F5Q8WV83 523 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 KBTBD7Q8WVZ9 684 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 ZFP42Q96MM3 310 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 RSAD1Q9HA92 442 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 XPO7Q9UIA9 1087 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 SHOC2Q9UQ13 582 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 IL4RP24394 825 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 ACAT1P24752 427 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 ATP5DP30049 168 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 SLC6A3Q01959 620 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 ROR1Q01973 937 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 NUGGCQ68CJ6 796 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 NT5DC4Q86YG4 428 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 PPIL6Q8IXY8 311 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 NAT8LQ8N9F0 302 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 SLC2A14Q8TDB8 520 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 PYROXD1Q8WU10 500 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 SNRNP25Q9BV90 132 aaKnown RBP16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 PLEKHA5Q9HAU0 1116 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 EURLQ9NYK6 297 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 NR2E3Q9Y5X4 410 aa16.69■□□□□ 0.26
CNKSR1-202ENST00000374253 SYNJ2BP-COX16A0A087WUM0 186 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 SMIM35A0A1B0GVV1 85 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 A0A1W2PPM1 405 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 DNM1LO00429 736 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 ALOX15BO15296 676 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 TCEA3O75764 348 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 STAU1O95793 577 aaKnown RBP16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 GNL1P36915 607 aaPredicted RBP16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 TAF1CQ15572 869 aaPredicted RBP16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 ALKAL1Q6UXT8 129 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 SPATS2Q86XZ4 545 aaKnown RBP16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 CCDC197Q8NCU1 140 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 FBXO36Q8NEA4 188 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 MAML1Q92585 1016 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 COX16Q9P0S2 106 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 LGALS13Q9UHV8 139 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 KIAA1257Q9ULG3 409 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 CHMP2BQ9UQN3 213 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 EFR3BQ9Y2G0 817 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 MBLAC1A4D2B0 266 aaPredicted RBP16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 KPNA7A9QM74 516 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 F5H423 210 aaPredicted RBP16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 H0YHG0 523 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 STX2P32856 288 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 HDAC4P56524 1084 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 MORN1Q5T089 497 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 IGDCC3Q8IVU1 814 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 THOC1Q96FV9 657 aaKnown RBP16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 RNF157Q96PX1 679 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 SLC4A5Q9BY07 1137 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 CNTN3Q9P232 1028 aa16.68■□□□□ 0.26
CNKSR1-202ENST00000374253 MYADML2A6NDP7 307 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 CLDN5O00501 218 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 KCNN4O15554 427 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 UBXN11Q5T124 520 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 C3orf62Q6ZUJ4 267 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 PQLC3Q8N755 202 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 PLD5Q8N7P1 536 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 PCDH19Q8TAB3 1148 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 PCDH18Q9HCL0 1135 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 UBN1Q9NPG3 1134 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 SAMD15Q9P1V8 674 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 UBQLN1Q9UMX0 589 aaKnown RBP16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 RBL1P28749 1068 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 TKTP29401 623 aaKnown RBP16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 AFF1P51825 1210 aaKnown RBP16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 NOMO1Q15155 1222 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 TWF2Q6IBS0 349 aaKnown RBP16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 TMEM110Q86TL2 294 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 SPOCK2Q92563 424 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 KLF6Q99612 283 aaPredicted RBP16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 MFHAS1Q9Y4C4 1052 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 IPPQ9Y573 584 aa16.67■□□□□ 0.26
CNKSR1-202ENST00000374253 MYCNP04198 464 aaPredicted RBP16.66■□□□□ 0.26
CNKSR1-202ENST00000374253 ABHD2P08910 425 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms