RNA–Protein interactions for RNA: ENST00000373559.8

HDAC8-203, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-203ENST00000373559 DDX42Q86XP3 938 aaKnown RBP eCLIP16.86■□□□□ 0.29
HDAC8-203ENST00000373559 ATOH1Q92858 354 aaPredicted RBP16.86■□□□□ 0.29
HDAC8-203ENST00000373559 ATP2A3Q93084 1043 aa16.86■□□□□ 0.29
HDAC8-203ENST00000373559 HEXIM2Q96MH2 286 aaKnown RBP16.86■□□□□ 0.29
HDAC8-203ENST00000373559 RNF38Q9H0F5 515 aa16.86■□□□□ 0.29
HDAC8-203ENST00000373559 CHRDQ9H2X0 955 aa16.86■□□□□ 0.29
HDAC8-203ENST00000373559 GMIPQ9P107 970 aa16.86■□□□□ 0.29
HDAC8-203ENST00000373559 SCML2Q9UQR0 700 aa16.86■□□□□ 0.29
HDAC8-203ENST00000373559 PROB1E7EW31 1015 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 LEFTY2O00292 366 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 ABL1P00519 1130 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 CHRNB1P11230 501 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 NBL1P41271 181 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 ZXDBP98169 803 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 GCNT1Q02742 428 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 EML3Q32P44 896 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 DPCR1Q3MIW9 517 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 HECTD3Q5T447 861 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 TRIM68Q6AZZ1 485 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 TXNDC11Q6PKC3 985 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 MAMSTRQ6ZN01 415 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 CPA6Q8N4T0 437 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 CNOT6LQ96LI5 555 aaKnown RBP16.85■□□□□ 0.29
HDAC8-203ENST00000373559 UBXN6Q9BZV1 441 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 EBF3Q9H4W6 596 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 TLR8Q9NR97 1041 aaKnown RBP16.85■□□□□ 0.29
HDAC8-203ENST00000373559 DUS2Q9NX74 493 aaKnown RBP16.85■□□□□ 0.29
HDAC8-203ENST00000373559 DACH1Q9UI36 760 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 CPQQ9Y646 472 aa16.85■□□□□ 0.29
HDAC8-203ENST00000373559 OTOL1A6NHN0 477 aaPredicted RBP16.84■□□□□ 0.29
HDAC8-203ENST00000373559 COCHO43405 550 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 PAEPP09466 180 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 ARSAP15289 507 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 IFNAR2P48551 515 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 KIF11P52732 1056 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 AMPD2Q01433 879 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 LRMPQ12912 555 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 LRRC32Q14392 662 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 SGO2Q562F6 1265 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 DGKKQ5KSL6 1271 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 CCDC186Q7Z3E2 898 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 MAML2Q8IZL2 1156 aaPredicted RBP16.84■□□□□ 0.29
HDAC8-203ENST00000373559 PPM1KQ8N3J5 372 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 ANKRD52Q8NB46 1076 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 CHFRQ96EP1 664 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 ZFRQ96KR1 1074 aaKnown RBP16.84■□□□□ 0.29
HDAC8-203ENST00000373559 PHOX2BQ99453 314 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 CYLDQ9NQC7 956 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 PRMT8Q9NR22 394 aaPredicted RBP16.84■□□□□ 0.29
HDAC8-203ENST00000373559 FAM86C1Q9NVL1 165 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 SPATA6Q9NWH7 488 aaPredicted RBP16.84■□□□□ 0.29
HDAC8-203ENST00000373559 CHORDC1Q9UHD1 332 aaPredicted RBP16.84■□□□□ 0.29
HDAC8-203ENST00000373559 FBXO4Q9UKT5 387 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 KIAA1257Q9ULG3 409 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 WNT6Q9Y6F9 365 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 USP3Q9Y6I4 520 aa16.84■□□□□ 0.29
HDAC8-203ENST00000373559 VPS13AQ96RL7 3174 aa16.83■□□□□ 0.29
HDAC8-203ENST00000373559 GOLGA6L22H0YM25 854 aa16.83■□□□□ 0.28
HDAC8-203ENST00000373559 LAMTOR5O43504 91 aa16.83■□□□□ 0.28
HDAC8-203ENST00000373559 MBL2P11226 248 aaPredicted RBP16.83■□□□□ 0.28
HDAC8-203ENST00000373559 ACO1P21399 889 aaKnown RBP16.83■□□□□ 0.28
HDAC8-203ENST00000373559 ERCC5P28715 1186 aaPredicted RBP16.83■□□□□ 0.28
HDAC8-203ENST00000373559 BCAT1P54687 386 aa16.83■□□□□ 0.28
HDAC8-203ENST00000373559 CCINQ13939 588 aa16.83■□□□□ 0.28
HDAC8-203ENST00000373559 ZNF528Q3MIS6 628 aa16.83■□□□□ 0.28
HDAC8-203ENST00000373559 CT47A1Q5JQC4 288 aaPredicted RBP16.83■□□□□ 0.28
HDAC8-203ENST00000373559 RBM43Q6ZSC3 357 aaKnown RBP16.83■□□□□ 0.28
HDAC8-203ENST00000373559 IRF2BP1Q8IU81 584 aa16.83■□□□□ 0.28
HDAC8-203ENST00000373559 EHBP1Q8NDI1 1231 aa16.83■□□□□ 0.28
HDAC8-203ENST00000373559 TTC8Q8TAM2 541 aa16.83■□□□□ 0.28
HDAC8-203ENST00000373559 JAKMIP2Q96AA8 810 aa16.83■□□□□ 0.28
HDAC8-203ENST00000373559 INTS2Q9H0H0 1204 aaKnown RBP16.83■□□□□ 0.28
HDAC8-203ENST00000373559 THAP9Q9H5L6 903 aa16.83■□□□□ 0.28
HDAC8-203ENST00000373559 CCSER2Q9H7U1 834 aa16.83■□□□□ 0.28
HDAC8-203ENST00000373559 ECT2Q9H8V3 914 aa16.83■□□□□ 0.28
HDAC8-203ENST00000373559 MYOFQ9NZM1 2061 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 GTPBP10A4D1E9 387 aaKnown RBP16.82■□□□□ 0.28
HDAC8-203ENST00000373559 O00370 1275 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 TRDMT1O14717 391 aaKnown RBP16.82■□□□□ 0.28
HDAC8-203ENST00000373559 SLC9A3R1O14745 358 aaPredicted RBP16.82■□□□□ 0.28
HDAC8-203ENST00000373559 CYP26A1O43174 497 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 TLR5O60602 858 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 NFATC1O95644 943 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 SP9P0CG40 484 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 VDRP11473 427 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 PSEN1P49768 467 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 MRE11P49959 708 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 SLC8A3P57103 927 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 MTAPQ13126 283 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 PON2Q15165 354 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 GOLGA7BQ2TAP0 167 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 TMEM196Q5HYL7 178 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 RAB41Q5JT25 222 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 KLHDC10Q6PID8 442 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 TTC30AQ86WT1 665 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 ARHGEF19Q8IW93 802 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 FAM114A1Q8IWE2 563 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 SYNPOQ8N3V7 929 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 ZNF276Q8N554 614 aa16.82■□□□□ 0.28
HDAC8-203ENST00000373559 GPT2Q8TD30 523 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms