RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 C4BPAP04003 597 aaKnown RBP17.13■□□□□ 0.33
HDAC8-202ENST00000373556 GBP1P32455 592 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 KMT5BQ4FZB7 885 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 ATL3Q6DD88 541 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 RHBDF2Q6PJF5 856 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 ACOT1Q86TX2 421 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 C12orf40Q86WS4 652 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 TTC30AQ86WT1 665 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 ABCA7Q8IZY2 2146 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 VRTNQ9H8Y1 702 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 DMAC2Q9NW81 257 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 RCOR1Q9UKL0 485 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 PCDHGA5Q9Y5G8 931 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 LAMA1P25391 3075 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 ATP8B3O60423 1300 aa17.13■□□□□ 0.33
HDAC8-202ENST00000373556 THADAQ6YHU6 1953 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 A0A1B0GVL5 298 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 SLC9A3R1O14745 358 aaPredicted RBP17.12■□□□□ 0.33
HDAC8-202ENST00000373556 TNFRSF10BO14763 440 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 PDIA4P13667 645 aaKnown RBP17.12■□□□□ 0.33
HDAC8-202ENST00000373556 AP3M2P53677 418 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 SLC5A3P53794 718 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 CLDN10P78369 228 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 CREB5Q02930 508 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 KDSRQ06136 332 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 ELF2Q15723 593 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 ANO7Q6IWH7 933 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 PDZD8Q8NEN9 1154 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 CCDC26Q8TAB7 109 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 CHAMP1Q96JM3 812 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 TNIP3Q96KP6 325 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 ZFRQ96KR1 1074 aaKnown RBP17.12■□□□□ 0.33
HDAC8-202ENST00000373556 KCTD10Q9H3F6 313 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 CCSER2Q9H7U1 834 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 DMAP1Q9NPF5 467 aaPredicted RBP17.12■□□□□ 0.33
HDAC8-202ENST00000373556 VPS45Q9NRW7 570 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 KRT82Q9NSB4 513 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 GMIPQ9P107 970 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 HMGXB4Q9UGU5 601 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 MMP17Q9ULZ9 603 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 NUP205Q92621 2012 aa17.12■□□□□ 0.33
HDAC8-202ENST00000373556 AP1G2O75843 785 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 RHOBTB1O94844 696 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 NR3C1P04150 777 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 ADH5P11766 374 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 CCDC130P13994 396 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 HNRNPLP14866 589 aaKnown RBP eCLIP17.11■□□□□ 0.33
HDAC8-202ENST00000373556 PFKFB1P16118 471 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 LIMK1P53667 647 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 LY6G5CQ5SRR4 150 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 HECTD3Q5T447 861 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 STPG1Q5TH74 334 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 SPOPLQ6IQ16 392 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 DDX42Q86XP3 938 aaKnown RBP eCLIP17.11■□□□□ 0.33
HDAC8-202ENST00000373556 SLC9A9Q8IVB4 645 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 FUKQ8N0W3 1084 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 ALLCQ8N6M5 410 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 KIAA1958Q8N8K9 716 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 OVCA2Q8WZ82 227 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 SMARCD1Q96GM5 515 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 PNKPQ96T60 521 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 ZDHHC4Q9NPG8 344 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.11■□□□□ 0.33
HDAC8-202ENST00000373556 FAM49BQ9NUQ9 324 aa17.11■□□□□ 0.33
HDAC8-202ENST00000373556 CACNA1BQ00975 2339 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 E2F8A0AVK6 867 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 BEST1O76090 585 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 KAT7O95251 611 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 KLF8O95600 359 aaPredicted RBP17.1■□□□□ 0.33
HDAC8-202ENST00000373556 ADH1CP00326 375 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 APODP05090 189 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 IRF1P10914 325 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 BCKDHBP21953 392 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 TIE1P35590 1138 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 PGFP49763 221 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 NDST1P52848 882 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 CRY1Q16526 586 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 ZACNQ401N2 412 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 USP39Q53GS9 565 aaKnown RBP17.1■□□□□ 0.33
HDAC8-202ENST00000373556 EMC10Q5UCC4 262 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 CEP135Q66GS9 1140 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 TMEM92Q6UXU6 159 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 RASSF3Q86WH2 238 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 TXNDC5Q8NBS9 432 aaKnown RBP17.1■□□□□ 0.33
HDAC8-202ENST00000373556 ZMIZ2Q8NF64 920 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 MDGA1Q8NFP4 955 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 SLC2A14Q8TDB8 520 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 WBP2Q969T9 261 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 SMOQ99835 787 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 ARHGEF4Q9NR80 690 aa17.1■□□□□ 0.33
HDAC8-202ENST00000373556 KMT2BQ9UMN6 2715 aaPredicted RBP17.09■□□□□ 0.33
HDAC8-202ENST00000373556 BCLAF3A2AJT9 711 aaKnown RBP17.09■□□□□ 0.33
HDAC8-202ENST00000373556 SGK1O00141 431 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 PDXKO00764 312 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 TM4SF5O14894 197 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 CHRM1P11229 460 aaPredicted RBP17.09■□□□□ 0.33
HDAC8-202ENST00000373556 P4HA1P13674 534 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 ASPAP45381 313 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 MAP3K7CLP57077 242 aa17.09■□□□□ 0.33
HDAC8-202ENST00000373556 MRPS21P82921 87 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms