RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 NACA2Q9H009 215 aa12.68□□□□□ -0.38
HDAC8-201ENST00000373554 HEBP1Q9NRV9 189 aa12.68□□□□□ -0.38
HDAC8-201ENST00000373554 ARHGAP26Q9UNA1 814 aa12.68□□□□□ -0.38
HDAC8-201ENST00000373554 SCML2Q9UQR0 700 aa12.68□□□□□ -0.38
HDAC8-201ENST00000373554 M0QYV0 167 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 ARNTLO00327 626 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 XPO1O14980 1071 aaKnown RBP12.67□□□□□ -0.38
HDAC8-201ENST00000373554 CYP26A1O43174 497 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 OLFM2O95897 454 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 ZDHHC11BP0C7U3 371 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 MBL2P11226 248 aaPredicted RBP12.67□□□□□ -0.38
HDAC8-201ENST00000373554 AOC1P19801 751 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 BRD2P25440 801 aaKnown RBP12.67□□□□□ -0.38
HDAC8-201ENST00000373554 USP8P40818 1118 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 ZNF132P52740 706 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 STARD6P59095 220 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 SLC7A9P82251 487 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 APBA1Q02410 837 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 PDE4CQ08493 712 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 USP4Q13107 963 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 KRT31Q15323 416 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 ZNF77Q15935 545 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 FKBP15Q5T1M5 1219 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 SNX30Q5VWJ9 437 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 ASTLQ6HA08 431 aaPredicted RBP12.67□□□□□ -0.38
HDAC8-201ENST00000373554 GJB7Q6PEY0 223 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 LCLAT1Q6UWP7 414 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 CCDC186Q7Z3E2 898 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 AOPEPQ8N6M6 819 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 SH3RF2Q8TEC5 729 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 MSANTD3Q96H12 275 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 ZFYVE19Q96K21 471 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 UBXN6Q9BZV1 441 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 VPS16Q9H269 839 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 CHORDC1Q9UHD1 332 aaPredicted RBP12.67□□□□□ -0.38
HDAC8-201ENST00000373554 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDAC8-201ENST00000373554 CNTN6Q9UQ52 1028 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 MRPS17Q9Y2R5 130 aaKnown RBP12.67□□□□□ -0.38
HDAC8-201ENST00000373554 CPQQ9Y646 472 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 PIAS3Q9Y6X2 628 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 MYO16Q9Y6X6 1858 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 MYH10P35580 1976 aa12.67□□□□□ -0.38
HDAC8-201ENST00000373554 ZNF638Q14966 1978 aaKnown RBP12.67□□□□□ -0.38
HDAC8-201ENST00000373554 KANSL1LA0AUZ9 987 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 RNF225M0QZC1 329 aaPredicted RBP12.66□□□□□ -0.38
HDAC8-201ENST00000373554 MED7O43513 233 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 TLR5O60602 858 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 TCF3P15923 654 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 CDK11BP21127 795 aaKnown RBP12.66□□□□□ -0.38
HDAC8-201ENST00000373554 PLA2G4AP47712 749 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 PSEN1P49768 467 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 KPNA1P52294 538 aaPredicted RBP12.66□□□□□ -0.38
HDAC8-201ENST00000373554 VCPP55072 806 aaKnown RBP12.66□□□□□ -0.38
HDAC8-201ENST00000373554 PDGFRLQ15198 375 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 CNGA2Q16280 664 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 SKOR2Q2VWA4 1001 aaPredicted RBP12.66□□□□□ -0.38
HDAC8-201ENST00000373554 IER5LQ5T953 404 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 SMYD5Q6GMV2 418 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 C1orf228Q6PIY5 440 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 ZNF852Q6ZMS4 543 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 TADA2BQ86TJ2 420 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 DDX42Q86XP3 938 aaKnown RBP eCLIP12.66□□□□□ -0.38
HDAC8-201ENST00000373554 SIX6OS1Q8N1H7 587 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 ARHGAP18Q8N392 663 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 UBA3Q8TBC4 463 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 TFAP2BQ92481 460 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 SHC3Q92529 594 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 BPIFA3Q9BQP9 254 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 RNF38Q9H0F5 515 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 CCSER2Q9H7U1 834 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 SIX2Q9NPC8 291 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 GKN1Q9NS71 199 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 SMPD4Q9NXE4 827 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 NAGPAQ9UK23 515 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 DNAJC12Q9UKB3 198 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 USP3Q9Y6I4 520 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 TICRRQ7Z2Z1 1910 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 ANAPC1Q9H1A4 1944 aa12.66□□□□□ -0.38
HDAC8-201ENST00000373554 COL4A2P08572 1712 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 HELZP42694 1942 aaKnown RBP12.65□□□□□ -0.38
HDAC8-201ENST00000373554 SYCE3A1L190 88 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 SMTNL1A8MU46 457 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 LEFTY2O00292 366 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 MAN2B1O00754 1011 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 COCHO43405 550 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 THAP12O43422 761 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 RALAP11233 206 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 GLULP15104 373 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 AVPR2P30518 371 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 GNA15P30679 374 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 IFNAR2P48551 515 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 ZNF165P49910 485 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 TKTL1P51854 596 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 RAPGEF1Q13905 1077 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 UBXN2BQ14CS0 331 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 NCAPHQ15003 741 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 ITPRIPL2Q3MIP1 535 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 RAB41Q5JT25 222 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 TMEM105Q8N8V8 129 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms