RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 ENOSF1Q7L5Y1 443 aa6.7□□□□□ -1.34
CHD6-202ENST00000373222 TBC1D1Q86TI0 1168 aaPredicted RBP6.7□□□□□ -1.34
CHD6-202ENST00000373222 ATCAYQ86WG3 371 aa6.7□□□□□ -1.34
CHD6-202ENST00000373222 CCDC33Q8N5R6 958 aa6.7□□□□□ -1.34
CHD6-202ENST00000373222 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.7□□□□□ -1.34
CHD6-202ENST00000373222 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.7□□□□□ -1.34
CHD6-202ENST00000373222 PRCCQ92733 491 aaPredicted RBP6.7□□□□□ -1.34
CHD6-202ENST00000373222 CENPTQ96BT3 561 aa6.7□□□□□ -1.34
CHD6-202ENST00000373222 ANAPC16Q96DE5 110 aa6.7□□□□□ -1.34
CHD6-202ENST00000373222 C12orf42Q96LP6 360 aa6.7□□□□□ -1.34
CHD6-202ENST00000373222 FGD4Q96M96 766 aa6.7□□□□□ -1.34
CHD6-202ENST00000373222 CPXM1Q96SM3 734 aa6.7□□□□□ -1.34
CHD6-202ENST00000373222 KLF6Q99612 283 aaPredicted RBP6.7□□□□□ -1.34
CHD6-202ENST00000373222 ACO2Q99798 780 aaKnown RBP6.7□□□□□ -1.34
CHD6-202ENST00000373222 TMEM109Q9BVC6 243 aa6.7□□□□□ -1.34
CHD6-202ENST00000373222 XYLT2Q9H1B5 865 aa6.7□□□□□ -1.34
CHD6-202ENST00000373222 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.7□□□□□ -1.34
CHD6-202ENST00000373222 SRRM3A6NNA2 597 aaPredicted RBP6.69□□□□□ -1.34
CHD6-202ENST00000373222 RASA4BC9J798 803 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 GOLGA8RI6L899 631 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 INO80B-WBP1J3KQ70 363 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 ASAP2O43150 1006 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 RASA4O43374 803 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 PSTPIP1O43586 416 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 TCEA3O75764 348 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 GRAP2O75791 330 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 PIGRP01833 764 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 PRKCBP05771 671 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 NFICP08651 508 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 TGFB3P10600 412 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 SSTR1P30872 391 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 SLC1A1P43005 524 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 GCLCP48506 637 aaPredicted RBP6.69□□□□□ -1.34
CHD6-202ENST00000373222 NEK3P51956 506 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 GTF2A1P52655 376 aaPredicted RBP6.69□□□□□ -1.34
CHD6-202ENST00000373222 NFKB2Q00653 900 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 CLUL1Q15846 466 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 CCNG2Q16589 344 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 LIN9Q5TKA1 542 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 XRRA1Q6P2D8 792 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 DNAJC24Q6P3W2 148 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 NPNTQ6UXI9 565 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 SPOCD1Q6ZMY3 1216 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 TRPM8Q7Z2W7 1104 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 BRSK2Q8IWQ3 736 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 ZBED8Q8IZ13 594 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 FITM2Q8N6M3 262 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 EXD1Q8NHP7 514 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 FBF1Q8TES7 1133 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 TCP11Q8WWU5 503 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 TBC1D31Q96DN5 1066 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 TGS1Q96RS0 853 aaKnown RBP6.69□□□□□ -1.34
CHD6-202ENST00000373222 LPIN3Q9BQK8 851 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 SMYD3Q9H7B4 428 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 ELP3Q9H9T3 547 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 PARVAQ9NVD7 372 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 EURLQ9NYK6 297 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 PRKAG3Q9UGI9 489 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 SIX4Q9UIU6 781 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 DOLKQ9UPQ8 538 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 CNTN6Q9UQ52 1028 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 DOCK3Q8IZD9 2030 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 hCG_1818297A0A087WSY0 165 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 C3orf70A6NLC5 250 aaPredicted RBP6.69□□□□□ -1.34
CHD6-202ENST00000373222 TTC36A6NLP5 189 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 SGK1O00141 431 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 ATP2A1O14983 1001 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 MAFO75444 373 aaPredicted RBP6.69□□□□□ -1.34
CHD6-202ENST00000373222 OAS1P00973 400 aaKnown RBP6.69□□□□□ -1.34
CHD6-202ENST00000373222 MYBL1P10243 752 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 CDKN2BP42772 138 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 OAZ1P54368 228 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 GEMIN4P57678 1058 aaKnown RBP6.69□□□□□ -1.34
CHD6-202ENST00000373222 DNAJC3Q13217 504 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 ZNF699Q32M78 642 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 C2orf27AQ580R0 203 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 FAM26DQ5JW98 314 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 FNBP1LQ5T0N5 605 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 TRNP1Q6NT89 227 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 LBX2Q6XYB7 198 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 ZNF677Q86XU0 584 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 SPATS2Q86XZ4 545 aaKnown RBP6.69□□□□□ -1.34
CHD6-202ENST00000373222 CPB2Q96IY4 423 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 CDHR1Q96JP9 859 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 RUNDC3BQ96NL0 473 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 SERPINB12Q96P63 405 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 PLVAPQ9BX97 442 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 NIFKQ9BYG3 293 aaKnown RBP6.69□□□□□ -1.34
CHD6-202ENST00000373222 MAGEB5Q9BZ81 275 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 IMPG2Q9BZV3 1241 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 RNPEPQ9H4A4 650 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 EFCC1Q9HA90 598 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 KIAA1586Q9HCI6 787 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 HOXC10Q9NYD6 342 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 SAMD15Q9P1V8 674 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 NUMBLQ9Y6R0 609 aa6.69□□□□□ -1.34
CHD6-202ENST00000373222 TRIP12Q14669 1992 aaPredicted RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 EXOC1LA0A1B0GW35 172 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 C19orf81C9J6K1 198 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 GPR25O00155 361 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms