RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 KRT80Q6KB66 452 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 TICAM1Q8IUC6 712 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 TPCN2Q8NHX9 752 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 DCPSQ96C86 337 aaKnown RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 LRGUKQ96M69 825 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 TRIM56Q9BRZ2 755 aaKnown RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 LSM14BQ9BX40 385 aaKnown RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 NMUR2Q9GZQ4 415 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 TRABDQ9H4I3 376 aa11.07□□□□□ -0.64
TRERF1-203ENST00000372917 MOV10Q9HCE1 1003 aaKnown RBP11.07□□□□□ -0.64
TRERF1-203ENST00000372917 A0A0B4J203 849 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 B8ZZF3 427 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 MAGEB2O15479 319 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 DENRO43583 198 aaKnown RBP11.06□□□□□ -0.64
TRERF1-203ENST00000372917 CD48P09326 243 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 CETPP11597 493 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 NAGAP17050 411 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 CCNE1P24864 410 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 EVI2BP34910 448 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 CDH15P55291 814 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 STX1BP61266 288 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 CDK16Q00536 496 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 CYP4F22Q6NT55 531 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 FIP1L1Q6UN15 594 aaKnown RBP11.06□□□□□ -0.64
TRERF1-203ENST00000372917 FRA10AC1Q70Z53 315 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 AKAP14Q86UN6 197 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 EFCAB3Q8N7B9 438 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 HSPH1Q92598 858 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 CALML4Q96GE6 196 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 FAM217BQ9NTX9 383 aaPredicted RBP11.06□□□□□ -0.64
TRERF1-203ENST00000372917 ASIC3Q9UHC3 531 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 GNEQ9Y223 722 aaKnown RBP11.06□□□□□ -0.64
TRERF1-203ENST00000372917 FOXP2O15409 715 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 EPN2O95208 641 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 KRT3P12035 628 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 PUM3Q15397 648 aaKnown RBP11.06□□□□□ -0.64
TRERF1-203ENST00000372917 ALX1Q15699 326 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 SLC1A5Q15758 541 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 FAM83BQ5T0W9 1011 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 PDXDC2PQ6P474 469 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 SLC30A10Q6XR72 485 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 ALYREFQ86V81 257 aaKnown RBP11.06□□□□□ -0.64
TRERF1-203ENST00000372917 CAND1Q86VP6 1230 aaKnown RBP11.06□□□□□ -0.64
TRERF1-203ENST00000372917 FIG4Q92562 907 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 HES6Q96HZ4 224 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 TSNARE1Q96NA8 513 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 RANBP9Q96S59 729 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 SLAIN2Q9P270 581 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 GRID1Q9ULK0 1009 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 CYP2D7A0A087X1C5 515 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 ANKRD63C9JTQ0 380 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 HOXC11O43248 304 aaPredicted RBP11.06□□□□□ -0.64
TRERF1-203ENST00000372917 PSMC3P17980 439 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 KCNJ1P48048 391 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 HSPA14Q0VDF9 509 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 NR1H3Q13133 447 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 DPYSQ14117 519 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 CTTNQ14247 550 aaKnown RBP11.06□□□□□ -0.64
TRERF1-203ENST00000372917 PRR23BQ6ZRT6 265 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 ADGRG6Q86SQ4 1221 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 IFNL1Q8IU54 200 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 RASGEF1CQ8N431 466 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 GRIN3AQ8TCU5 1115 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 RASGRP4Q8TDF6 673 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 ZFYVE19Q96K21 471 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 STRBPQ96SI9 672 aaKnown RBP11.06□□□□□ -0.64
TRERF1-203ENST00000372917 SMARCAD1Q9H4L7 1026 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 DDX28Q9NUL7 540 aaKnown RBP11.06□□□□□ -0.64
TRERF1-203ENST00000372917 WDR70Q9NW82 654 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 GDAP2Q9NXN4 497 aa11.06□□□□□ -0.64
TRERF1-203ENST00000372917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRERF1-203ENST00000372917 PCM1Q15154 2024 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 PODXLO00592 558 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 GAS7O60861 476 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 ATE1O95260 518 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 MYL2P10916 166 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 CENPAP49450 140 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 NPTX1Q15818 432 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 MOGQ16653 247 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 GPR107Q5VW38 600 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 CCDC137Q6PK04 289 aaKnown RBP11.05□□□□□ -0.64
TRERF1-203ENST00000372917 CYP20A1Q6UW02 462 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 GPR180Q86V85 440 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 SYCE1Q8N0S2 351 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 TTC25Q96NG3 672 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 HEMGNQ9BXL5 484 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 ANKMY1Q9P2S6 941 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 NIP7Q9Y221 180 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRERF1-203ENST00000372917 FAM25EA8MYX2 175 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 ATP6V1G2-DDX39BF2Z307 99 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 RBAK-RBAKDNI3L0D1 243 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 TK2O00142 265 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 MAN1A2O60476 641 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 RSL1D1O76021 490 aaKnown RBP11.05□□□□□ -0.64
TRERF1-203ENST00000372917 GH2P01242 217 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 CALM1P0DP23 149 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 CALM2P0DP24 149 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 CALM3P0DP25 149 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 RCAN1P53805 252 aa11.05□□□□□ -0.64
TRERF1-203ENST00000372917 POU6F2P78424 691 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms