RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 COX4I2Q96KJ9 171 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 PHACTR1Q9C0D0 580 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 PUS7LQ9H0K6 701 aaKnown RBP15.75■□□□□ 0.11
COL5A1-201ENST00000371817 ANXA6P08133 673 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 RARGP13631 454 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 ATF6P18850 670 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 KANSL2Q9H9L4 492 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 COPRSQ9NQ92 184 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 CYP26A1O43174 497 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 PDE8BO95263 885 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 GYPCP04921 128 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 TRIM32Q13049 653 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 YTHDF3Q7Z739 585 aaKnown RBP15.75■□□□□ 0.11
COL5A1-201ENST00000371817 C10orf53Q8N6V4 93 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 ATXN2LQ8WWM7 1075 aaKnown RBP15.75■□□□□ 0.11
COL5A1-201ENST00000371817 C18orf25Q96B23 403 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-201ENST00000371817 OSBPL6Q9BZF3 934 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 TJP2Q9UDY2 1190 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 MCL1Q07820 350 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 MARCH10Q8NA82 808 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-201ENST00000371817 ZNF221Q9UK13 617 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 A0A0X1KG70 313 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 BMP3P12645 472 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 ATP6V1C1P21283 382 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 TGM2P21980 687 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 TOB2Q14106 344 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-201ENST00000371817 TXNRD1Q16881 649 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 RASSF5Q8WWW0 418 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 ZC3H10Q96K80 434 aaKnown RBP15.75■□□□□ 0.11
COL5A1-201ENST00000371817 DNAJC7Q99615 494 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 EPB41L4BQ9H329 900 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 RSAD1Q9HA92 442 aa15.75■□□□□ 0.11
COL5A1-201ENST00000371817 CDK17Q00537 523 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 SWT1Q5T5J6 900 aaKnown RBP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 SAMD3Q8N6K7 520 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 LRRC20Q8TCA0 184 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 NUDT12Q9BQG2 462 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 TCF7L2Q9NQB0 619 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 WDR35Q9P2L0 1181 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 SPEF1Q9Y4P9 236 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 POLR2EP19388 210 aaKnown RBP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 SLC16A2P36021 539 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 TOP3AQ13472 1001 aaPredicted RBP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 ACCSLQ4AC99 568 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 PTRHD1Q6GMV3 140 aaKnown RBP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 ABRAXAS1Q6UWZ7 409 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 FXR1P51114 621 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 RAD51Q06609 339 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 ZNF605Q86T29 641 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 SCN4BQ8IWT1 228 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 YME1L1Q96TA2 773 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 GPR108Q9NPR9 543 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 PNMA8BQ9ULN7 279 aaPredicted RBP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 A0A0G2JPF8 293 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 HNRNPCL3B7ZW38 293 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 TIMM44O43615 452 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 TMCC2O75069 709 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 HNRNPCL4P0DMR1 293 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 RHAGQ02094 409 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 AP3B2Q13367 1082 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 GSDMCQ9BYG8 508 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 PIF1Q9H611 641 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 CCSER2Q9H7U1 834 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 RBAKQ9NYW8 714 aaPredicted RBP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 RNF112Q9ULX5 631 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 ARF4P18085 180 aaPredicted RBP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 UTS2BQ765I0 119 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 C8orf59Q8N0T1 100 aaPredicted RBP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 NSMCE2Q96MF7 247 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 NDNQ99608 321 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 TRMT13Q9NUP7 481 aaKnown RBP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 PHF11Q9UIL8 331 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 MYH13Q9UKX3 1938 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 SLC16A3O15427 465 aaKnown RBP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 KHDRBS3O75525 346 aaKnown RBP15.74■□□□□ 0.11
COL5A1-201ENST00000371817 A1BGP04217 495 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 MAPK1P28482 360 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 AGKQ53H12 422 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 PYDC1Q8WXC3 89 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 YEATS2Q9ULM3 1422 aa15.74■□□□□ 0.11
COL5A1-201ENST00000371817 H0YIN7 160 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 PIK3CDO00329 1044 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 CCNKO75909 580 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 KCNJ1P48048 391 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 HAVCR1Q96D42 359 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 PCDH12Q9NPG4 1184 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 SLC25A13Q9UJS0 675 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 NOS3P29474 1203 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 EIF2B5Q13144 721 aaKnown RBP15.73■□□□□ 0.11
COL5A1-201ENST00000371817 PDK3Q15120 406 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 PADI6Q6TGC4 694 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 CPA5Q8WXQ8 436 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 NCKIPSDQ9NZQ3 722 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 DENND3A2RUS2 1198 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 PSMG1O95456 288 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 AKT1P31749 480 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 PRELPP51888 382 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 TCIRG1Q13488 830 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 PRR23BQ6ZRT6 265 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms