RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 CYP4F3Q08477 520 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 PLCL1Q15111 1095 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 DUSP28Q4G0W2 176 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 IYDQ6PHW0 289 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 ZNF574Q6ZN55 896 aaPredicted RBP4.15□□□□□ -1.74
MCF2-203ENST00000370576 CATSPERGQ6ZRH7 1159 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 OSTM1Q86WC4 334 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 MRPL43Q8N983 215 aaKnown RBP4.15□□□□□ -1.74
MCF2-203ENST00000370576 SLC44A5Q8NCS7 719 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 CTCFLQ8NI51 663 aaPredicted RBP4.15□□□□□ -1.74
MCF2-203ENST00000370576 PAGE5Q96GU1 130 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 C1orf159Q96HA4 380 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 CMTM3Q96MX0 182 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 MXD3Q9BW11 206 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 ETNK1Q9HBU6 452 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 TUFT1Q9NNX1 390 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 NRIP3Q9NQ35 241 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 IL19Q9UHD0 177 aa4.15□□□□□ -1.74
MCF2-203ENST00000370576 HELZP42694 1942 aaKnown RBP4.15□□□□□ -1.75
MCF2-203ENST00000370576 A0A1W2PQC6 194 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 KLRF2D3W0D1 207 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 RBAK-RBAKDNI3L0D1 243 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 HRO43593 1189 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 CACNG3O60359 315 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 PQBP1O60828 265 aaKnown RBP4.15□□□□□ -1.75
MCF2-203ENST00000370576 ZNF202O95125 648 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 GCNT3O95395 438 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 MT-CO1P00395 513 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 MYCLP12524 364 aaPredicted RBP4.15□□□□□ -1.75
MCF2-203ENST00000370576 KELP23276 732 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 CAP1Q01518 475 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 STX1AQ16623 288 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 PFKFB4Q16877 469 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 CES4AQ5XG92 561 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 MAMDC2Q7Z304 686 aaPredicted RBP4.15□□□□□ -1.75
MCF2-203ENST00000370576 DGLUCYQ7Z3D6 616 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 REC114Q7Z4M0 266 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 DNAJB7Q7Z6W7 309 aaPredicted RBP4.15□□□□□ -1.75
MCF2-203ENST00000370576 ADSSL1Q8N142 457 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 FIBINQ8TAL6 211 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 CHAMP1Q96JM3 812 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 TCEANC2Q96MN5 208 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 TBCDQ9BTW9 1192 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 UNKQ9C0B0 810 aaKnown RBP4.15□□□□□ -1.75
MCF2-203ENST00000370576 KCNF1Q9H3M0 494 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 PARVGQ9HBI0 331 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 MID1IP1Q9NPA3 183 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 TMEM39AQ9NV64 488 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 ETAA1Q9NY74 926 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 FAM53CQ9NYF3 392 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 RWDD2AQ9UIY3 292 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 MAN1B1Q9UKM7 699 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 LRCH1Q9Y2L9 728 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 KCNMB2Q9Y691 235 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 BTNL10A8MVZ5 291 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 MEN1O00255 615 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 PAGE1O75459 146 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 SERPINF2P08697 491 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 PTPRAP18433 802 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 ATP6V1E1P36543 226 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 USP8P40818 1118 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 CCNHP51946 323 aaPredicted RBP4.15□□□□□ -1.75
MCF2-203ENST00000370576 B2MP61769 119 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 UBXN1Q04323 297 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 PTK2BQ14289 1009 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 R3HDM1Q15032 1099 aaKnown RBP4.15□□□□□ -1.75
MCF2-203ENST00000370576 TSTQ16762 297 aaKnown RBP4.15□□□□□ -1.75
MCF2-203ENST00000370576 TTC38Q5R3I4 469 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 EMC10Q5UCC4 262 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 TTI2Q6NXR4 508 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 BICDL1Q6ZP65 573 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 MTERF4Q7Z6M4 381 aaKnown RBP4.15□□□□□ -1.75
MCF2-203ENST00000370576 TLK2Q86UE8 772 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 MAPKAPK5Q8IW41 473 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 PEX5LQ8IYB4 626 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 MLKLQ8NB16 471 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 IQCDQ96DY2 449 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 RIT2Q99578 217 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 BCL7BQ9BQE9 202 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 HGH1Q9BTY7 390 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 LRRC2Q9BYS8 371 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 KAT14Q9H8E8 782 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 CYP4F12Q9HCS2 524 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 OLFML3Q9NRN5 406 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 SNX8Q9Y5X2 465 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 DENND4CQ5VZ89 1909 aa4.15□□□□□ -1.75
MCF2-203ENST00000370576 IGKV6-21A0A0C4DH24 114 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 A0A1W2PPC4 97 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 FAM205CA6NFA0 338 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 CCDC169A6NNP5 214 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 ZNF891A8MT65 544 aaPredicted RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 ADAM20O43506 726 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 OFD1O75665 1012 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 EPN2O95208 641 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 POTEJP0CG39 1038 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 PLCG1P19174 1290 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 IL10P22301 178 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 GNA11P29992 359 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 ADRA1BP35368 520 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 PMS1P54277 932 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms