RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ATF7IP2Q5U623 682 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 MICALL2Q8IY33 904 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 MOSPD2Q8NHP6 518 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 C6orf62Q9GZU0 229 aaPredicted RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 WHRNQ9P202 907 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 PDS5AQ29RF7 1337 aaKnown RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 SAMD9LQ8IVG5 1584 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 FDX1P10109 184 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 RBP3P10745 1247 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 GPC1P35052 558 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 KCNMA1Q12791 1236 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 FAM45AQ8TCE6 357 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 ACSF2Q96CM8 615 aaPredicted RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 AVENQ9NQS1 362 aaPredicted RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 SAC3D1A6NKF1 404 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 FAM200BP0CF97 657 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 RASA2Q15283 850 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 ARMC4Q5T2S8 1044 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 ANKS6Q68DC2 871 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 OOSP2Q86WS3 158 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 ADSSL1Q8N142 457 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 RNASE11Q8TAA1 199 aaKnown RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 USP13Q92995 863 aaPredicted RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 PCDHB7Q9Y5E2 793 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 SPACA6W5XKT8 324 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 PCNAP12004 261 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 DGKKQ5KSL6 1271 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 NAIF1Q69YI7 327 aaPredicted RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 RDM1Q8NG50 284 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 WDR36Q8NI36 951 aaKnown RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 PRRG3Q9BZD7 231 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 MYMKA6NI61 221 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 FAM47E-STBD1D6RA91 191 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 GLRA3O75311 464 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 PARNO95453 639 aaKnown RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 PCSK1P29120 753 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 LTKP29376 864 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 RPS6KB2Q9UBS0 482 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 CENPXA8MT69 81 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 RXRBP28702 533 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 MAGEA10P43363 369 aaPredicted RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 GPR1P46091 355 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 EMC2Q15006 297 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 TYW3Q6IPR3 259 aaKnown RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 LPCAT2Q7L5N7 544 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 LRRC34Q8IZ02 419 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 ATG16L2Q8NAA4 619 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 CASKIN2Q8WXE0 1202 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 FRMD8Q9BZ67 464 aaPredicted RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 UBE2OQ9C0C9 1292 aaKnown RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 CCT8P50990 548 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.85□□□□□ -0.35
HCFC1-202ENST00000369984 EPHA10Q5JZY3 1008 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 NOA1Q8NC60 698 aaKnown RBP12.85□□□□□ -0.35
HCFC1-202ENST00000369984 SGF29Q96ES7 293 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 SNX8Q9Y5X2 465 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 XKR3Q5GH77 459 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 PLA2G4FQ68DD2 849 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 ZNF772Q68DY9 489 aaPredicted RBP12.85□□□□□ -0.35
HCFC1-202ENST00000369984 LRRC6Q86X45 466 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 ZNF614Q8N883 585 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 TC2NQ8N9U0 490 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 ANKS1AQ92625 1134 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 MIEF2Q96C03 454 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 BCL2L14Q9BZR8 327 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 NAGPAQ9UK23 515 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.85□□□□□ -0.35
HCFC1-202ENST00000369984 HLA-DRAP01903 254 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 MAPK1P28482 360 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 GLRBP48167 497 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 CDH18Q13634 790 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 ARMC3Q5W041 872 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 MGAT4DA6NG13 374 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 BCL10O95999 233 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 IL6P05231 212 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 FCGR1AP12314 374 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 CCDC130P13994 396 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 POLD3Q15054 466 aaPredicted RBP12.85□□□□□ -0.35
HCFC1-202ENST00000369984 ZSWIM7Q19AV6 140 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 RNFT2Q96EX2 444 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 MPP4Q96JB8 637 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 CHST12Q9NRB3 414 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 ERBB3P21860 1342 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 MAPK7Q13164 816 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 ESRP1Q6NXG1 681 aaKnown RBP12.85□□□□□ -0.35
HCFC1-202ENST00000369984 AAR2Q9Y312 384 aaKnown RBP12.85□□□□□ -0.35
HCFC1-202ENST00000369984 AFDNP55196 1824 aaKnown RBP12.85□□□□□ -0.35
HCFC1-202ENST00000369984 SPATA31E1Q6ZUB1 1445 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 GNG14A0A1W2PPG7 69 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 HPGDP15428 266 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 SNRPFP62306 86 aaKnown RBP12.85□□□□□ -0.35
HCFC1-202ENST00000369984 CAMK2GQ13555 558 aaPredicted RBP12.85□□□□□ -0.35
HCFC1-202ENST00000369984 ACAD10Q6JQN1 1059 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 ZNF544Q6NX49 715 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 COMMD8Q9NX08 183 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 CHORDC1Q9UHD1 332 aaPredicted RBP12.85□□□□□ -0.35
HCFC1-202ENST00000369984 TFR2Q9UP52 801 aa12.85□□□□□ -0.35
HCFC1-202ENST00000369984 VPS26AO75436 327 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms