RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 PDGFRLQ15198 375 aa21.73■■□□□ 1.07
SMNDC1-201ENST00000369592 CCDC40Q4G0X9 1142 aa21.73■■□□□ 1.07
SMNDC1-201ENST00000369592 TRIM68Q6AZZ1 485 aa21.73■■□□□ 1.07
SMNDC1-201ENST00000369592 GPRIN1Q7Z2K8 1008 aa21.73■■□□□ 1.07
SMNDC1-201ENST00000369592 IRF2BP1Q8IU81 584 aa21.73■■□□□ 1.07
SMNDC1-201ENST00000369592 SH3RF2Q8TEC5 729 aa21.73■■□□□ 1.07
SMNDC1-201ENST00000369592 OSCP1Q8WVF1 389 aa21.73■■□□□ 1.07
SMNDC1-201ENST00000369592 FBXO32Q969P5 355 aa21.73■■□□□ 1.07
SMNDC1-201ENST00000369592 TMEM176AQ96HP8 235 aa21.73■■□□□ 1.07
SMNDC1-201ENST00000369592 ZFRQ96KR1 1074 aaKnown RBP21.73■■□□□ 1.07
SMNDC1-201ENST00000369592 CHRDQ9H2X0 955 aa21.73■■□□□ 1.07
SMNDC1-201ENST00000369592 FAM186AA6NE01 2351 aa21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 ARSAP15289 507 aa21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 ACO1P21399 889 aaKnown RBP21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 ADORA2BP29275 332 aa21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 EML3Q32P44 896 aa21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 ZNF394Q53GI3 561 aa21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 MLKLQ8NB16 471 aa21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 DUSP16Q9BY84 665 aa21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 EBF3Q9H4W6 596 aa21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 GMIPQ9P107 970 aa21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 CHORDC1Q9UHD1 332 aaPredicted RBP21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 NDRG2Q9UN36 371 aaKnown RBP21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 SCML2Q9UQR0 700 aa21.72■■□□□ 1.07
SMNDC1-201ENST00000369592 LEFTY2O00292 366 aa21.71■■□□□ 1.07
SMNDC1-201ENST00000369592 KPNA1P52294 538 aaPredicted RBP21.71■■□□□ 1.07
SMNDC1-201ENST00000369592 KCNH2Q12809 1159 aa21.71■■□□□ 1.07
SMNDC1-201ENST00000369592 GAS6Q14393 721 aa21.71■■□□□ 1.07
SMNDC1-201ENST00000369592 TTC8Q8TAM2 541 aa21.71■■□□□ 1.07
SMNDC1-201ENST00000369592 NELL1Q92832 810 aa21.71■■□□□ 1.07
SMNDC1-201ENST00000369592 HEXIM2Q96MH2 286 aaKnown RBP21.71■■□□□ 1.07
SMNDC1-201ENST00000369592 UBXN6Q9BZV1 441 aa21.71■■□□□ 1.07
SMNDC1-201ENST00000369592 FBXO44Q9H4M3 255 aa21.71■■□□□ 1.07
SMNDC1-201ENST00000369592 USP3Q9Y6I4 520 aa21.71■■□□□ 1.07
SMNDC1-201ENST00000369592 MYOFQ9NZM1 2061 aa21.71■■□□□ 1.07
SMNDC1-201ENST00000369592 COCHO43405 550 aa21.7■■□□□ 1.06
SMNDC1-201ENST00000369592 TRIM21P19474 475 aaKnown RBP21.7■■□□□ 1.06
SMNDC1-201ENST00000369592 TBXAS1P24557 533 aaPredicted RBP21.7■■□□□ 1.06
SMNDC1-201ENST00000369592 ID4P47928 161 aa21.7■■□□□ 1.06
SMNDC1-201ENST00000369592 KIF11P52732 1056 aa21.7■■□□□ 1.06
SMNDC1-201ENST00000369592 CCINQ13939 588 aa21.7■■□□□ 1.06
SMNDC1-201ENST00000369592 IER2Q9BTL4 223 aa21.7■■□□□ 1.06
SMNDC1-201ENST00000369592 LINC00597Q9H2U6 94 aa21.7■■□□□ 1.06
SMNDC1-201ENST00000369592 LMAN1LQ9HAT1 526 aa21.7■■□□□ 1.06
SMNDC1-201ENST00000369592 PRMT8Q9NR22 394 aaPredicted RBP21.7■■□□□ 1.06
SMNDC1-201ENST00000369592 CPQQ9Y646 472 aa21.7■■□□□ 1.06
SMNDC1-201ENST00000369592 DCHS1Q96JQ0 3298 aa21.7■■□□□ 1.06
SMNDC1-201ENST00000369592 TRDMT1O14717 391 aaKnown RBP21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 SP9P0CG40 484 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 TDGF1P13385 188 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 IFRD2Q12894 506 aaPredicted RBP21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 MTAPQ13126 283 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 GAB4Q2WGN9 574 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 ZNF528Q3MIS6 628 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 HECTD3Q5T447 861 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 CC2D1AQ6P1N0 951 aaPredicted RBP21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 EHBP1Q8NDI1 1231 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 DNAI2Q9GZS0 605 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 CCSER2Q9H7U1 834 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 ECT2Q9H8V3 914 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 CYLDQ9NQC7 956 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 OSER1Q9NX31 292 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 DUS2Q9NX74 493 aaKnown RBP21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 FBXO4Q9UKT5 387 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 WNT6Q9Y6F9 365 aa21.69■■□□□ 1.06
SMNDC1-201ENST00000369592 FGFR1OPO95684 399 aaKnown RBP21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 AFPP02771 609 aaKnown RBP21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 LRMPQ12912 555 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 DPCR1Q3MIW9 517 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 PKDCCQ504Y2 493 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 TMEM196Q5HYL7 178 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 RAB41Q5JT25 222 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 TTC30AQ86WT1 665 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 ZNF276Q8N554 614 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 ANKRD52Q8NB46 1076 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 KAT5Q92993 513 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 NT5C1BQ96P26 610 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 IPO9Q96P70 1041 aaKnown RBP21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 NUP62CLQ9H1M0 184 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 CNTN6Q9UQ52 1028 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 ATG2BQ96BY7 2078 aa21.68■■□□□ 1.06
SMNDC1-201ENST00000369592 RNF225M0QZC1 329 aaPredicted RBP21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 ABL1P00519 1130 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 CCDC192P0DO97 292 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 GJA4P35212 333 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 YWHAEP62258 255 aaKnown RBP21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 GCNT1Q02742 428 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 PON2Q15165 354 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 DGKKQ5KSL6 1271 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 RBM43Q6ZSC3 357 aaKnown RBP21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 CCDC186Q7Z3E2 898 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 SCD5Q86SK9 330 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 GPT2Q8TD30 523 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 ATP2A3Q93084 1043 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 KREMEN1Q96MU8 473 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 ZSWIM1Q9BR11 485 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 NMUR1Q9HB89 426 aa21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 FBRSL1Q9HCM7 1045 aaKnown RBP21.67■■□□□ 1.06
SMNDC1-201ENST00000369592 SPATA6Q9NWH7 488 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms