RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 TTC9BQ8N6N2 239 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 FAM172AQ8WUF8 416 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 KCTD13Q8WZ19 329 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 OSBPL8Q9BZF1 889 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 GDF3Q9NR23 364 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 USP18Q9UMW8 372 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 PLXNA3P51805 1871 aa14.78□□□□□ -0.04
HMGCS2-201ENST00000369406 LRRD1A4D1F6 860 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 CCDC151A5D8V7 595 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 PHF2O75151 1096 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 TADA2AO75478 443 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 OAZ2O95190 189 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 CYP2F1P24903 491 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 CDKN2BP42772 138 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 PGFP49763 221 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 TUBB4BP68371 445 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 CYP1B1Q16678 543 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 CA9Q16790 459 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 RTP2Q5QGT7 225 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 FAM171A1Q5VUB5 890 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 SYPL2Q5VXT5 272 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 KAZNQ674X7 775 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 CNKSR3Q6P9H4 555 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 CCNI2Q6ZMN8 369 aaPredicted RBP14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 SMARCD1Q96GM5 515 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 NEUROG2Q9H2A3 272 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 CWH43Q9H720 699 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 EPB41L5Q9HCM4 733 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 CSNK1G1Q9HCP0 422 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 CYLDQ9NQC7 956 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 DSEQ9UL01 958 aa14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.77□□□□□ -0.04
HMGCS2-201ENST00000369406 CDH23Q9H251 3354 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 YJEFN3A6XGL0 299 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 E7ENQ6 273 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 USP17L7P0C7H9 530 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 ECHS1P30084 290 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 GPR15P49685 360 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 CTCFP49711 727 aaPredicted RBP14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 MRPS5P82675 430 aaKnown RBP14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 SNX1Q13596 522 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 BRD3Q15059 726 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 PKN2Q16513 984 aaKnown RBP14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 SLC39A12Q504Y0 691 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 CEP57Q86XR8 500 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 DEFB106AQ8N104 65 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 HSPH1Q92598 858 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 TBCBQ99426 244 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 NGRNQ9NPE2 291 aaKnown RBP14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 TMPRSS4Q9NRS4 437 aa14.77□□□□□ -0.05
HMGCS2-201ENST00000369406 hCG_1818297A0A087WSY0 165 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 DGKIO75912 1065 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 VNN2O95498 520 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 TIMP1P01033 207 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 AMHP03971 560 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 EN2P19622 333 aaPredicted RBP14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 MMRN1Q13201 1228 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 ZC3H12AQ5D1E8 599 aaKnown RBP14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 SDHAF4Q5VUM1 108 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 POLNQ7Z5Q5 900 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 SCAMP5Q8TAC9 235 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 SPATA18Q8TC71 538 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 MAGOHBQ96A72 148 aaKnown RBP14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 ZCWPW1Q9H0M4 648 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 FAM153BP0C7A2 387 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 ACADSBP45954 432 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 ARSEP51690 589 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 DAOAP59103 153 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 IKBKEQ14164 716 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 MRPL58Q14197 206 aaKnown RBP14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 FAM153CQ494X1 144 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 GLE1Q53GS7 698 aaKnown RBP14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 ZDHHC17Q8IUH5 632 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 C12orf50Q8NA57 414 aaPredicted RBP14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 CENPIQ92674 756 aaPredicted RBP14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 PGLYRP2Q96PD5 576 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 NAP1L3Q99457 506 aaPredicted RBP14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 SLITRK6Q9H5Y7 841 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 RC3H2Q9HBD1 1191 aaKnown RBP14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 ASNSD1Q9NWL6 643 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 SAE1Q9UBE0 346 aaPredicted RBP14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 FAM153AQ9UHL3 310 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 NAALADL1Q9UQQ1 740 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 FAN1Q9Y2M0 1017 aa14.76□□□□□ -0.05
HMGCS2-201ENST00000369406 KIAA0355O15063 1070 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 EFEMP2O95967 443 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 FGFR3P22607 806 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 KDELR1P24390 212 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 SDC4P31431 198 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 PCK1P35558 622 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 COILP38432 576 aaPredicted RBP14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 SMC1AQ14683 1233 aaKnown RBP14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 TAZQ16635 292 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 FAM182AQ5T1J6 154 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 ZFYVE27Q5T4F4 411 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 FUT10Q6P4F1 479 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 C16orf59Q7L2K0 433 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 NECAB2Q7Z6G3 386 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 UBE2Q1Q7Z7E8 422 aa14.75□□□□□ -0.05
HMGCS2-201ENST00000369406 PRUNE1Q86TP1 453 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms