RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 C3orf70A6NLC5 250 aaPredicted RBP13.45□□□□□ -0.26
CHD1L-202ENST00000369258 KRT3P12035 628 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 KCNA3P22001 575 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 PGM1P36871 562 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 RGS7P49802 495 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 ATXN3P54252 364 aaPredicted RBP13.45□□□□□ -0.26
CHD1L-202ENST00000369258 PSMD6Q15008 389 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 Q3C1V9 767 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 PEBP4Q96S96 227 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 SMYD2Q9NRG4 433 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 FARP1Q9Y4F1 1045 aaPredicted RBP13.45□□□□□ -0.26
CHD1L-202ENST00000369258 MRPL42Q9Y6G3 142 aaKnown RBP13.45□□□□□ -0.26
CHD1L-202ENST00000369258 NFASCO94856 1347 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 CNTNAP2Q9UHC6 1331 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 DLDP09622 509 aaKnown RBP13.45□□□□□ -0.26
CHD1L-202ENST00000369258 ABCG1P45844 678 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 GTF2A2P52657 109 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 ATXN1P54253 815 aaKnown RBP13.45□□□□□ -0.26
CHD1L-202ENST00000369258 KRT76Q01546 638 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 TMEM132AQ24JP5 1023 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 LRRC38Q5VT99 294 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 OR52E8Q6IFG1 317 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 KRT27Q7Z3Y8 459 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 VSIG10LQ86VR7 867 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 MCF2L2Q86YR7 1114 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 ARHGAP24Q8N264 748 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 NAT8LQ8N9F0 302 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 ATXN7L3BQ96GX2 97 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 NTPCRQ9BSD7 190 aaKnown RBP13.45□□□□□ -0.26
CHD1L-202ENST00000369258 RAB6BQ9NRW1 208 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 PCMTD2Q9NV79 361 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 STX18Q9P2W9 335 aaKnown RBP13.45□□□□□ -0.26
CHD1L-202ENST00000369258 FETUBQ9UGM5 382 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 MAD1L1Q9Y6D9 718 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 SNCAIPQ9Y6H5 919 aa13.45□□□□□ -0.26
CHD1L-202ENST00000369258 VWA5AO00534 786 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 ERBB2P04626 1255 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 APRTP07741 180 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 MSX2P35548 267 aaPredicted RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 CACNA2D1P54289 1103 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 OLIG2Q13516 323 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 ZC3H12AQ5D1E8 599 aaKnown RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 PPP6R3Q5H9R7 873 aaPredicted RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 NBPF12Q5TAG4 269 aaPredicted RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 PPP1R2P3Q6NXS1 205 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 DARS2Q6PI48 645 aaKnown RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 RSPH3Q86UC2 560 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 PDIK1LQ8N165 341 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 GALNT15Q8N3T1 639 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 C12orf29Q8N999 325 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 CFAP61Q8NHU2 1237 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 SLC35B2Q8TB61 432 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 CCDC110Q8TBZ0 833 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 SKA1Q96BD8 255 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 IMPG2Q9BZV3 1241 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 CYP4F11Q9HBI6 524 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 ARHGEF4Q9NR80 690 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 COL4A5P29400 1685 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 TRIP11Q15643 1979 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 STAM2O75886 525 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 DGAT1O75907 488 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 MIPP30301 263 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 SFNP31947 248 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 FKBP1AP62942 108 aaKnown RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 AP1B1Q10567 949 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 VWA5B1Q5TIE3 1220 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 FAM219BQ5XKK7 198 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 RBM15BQ8NDT2 890 aaKnown RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 PYDC1Q8WXC3 89 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 SRPK1Q96SB4 655 aaKnown RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 TRIM4Q9C037 500 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 KRT82Q9NSB4 513 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 IQANK1A0A1B0GTG1 560 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 H7C0C1 242 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 DNAJC6O75061 913 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 PDE5AO76074 875 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 CALB1P05937 261 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 INHBAP08476 426 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 TFE3P19532 575 aaPredicted RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 ATP5OP48047 213 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 TMPRSS15P98073 1019 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 SLC25A3Q00325 362 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 SLC25A11Q02978 314 aaKnown RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 BST1Q10588 318 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 CAPSQ13938 189 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 KRT72Q14CN4 511 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 CHI3L2Q15782 390 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 ATG14Q6ZNE5 492 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 PRPF31Q8WWY3 499 aaKnown RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 OXNAD1Q96HP4 312 aaPredicted RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 RILPQ96NA2 401 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 DHRS4Q9BTZ2 278 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 DEFB129Q9H1M3 183 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 C17orf75Q9HAS0 396 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 DDX56Q9NY93 547 aaKnown RBP13.44□□□□□ -0.26
CHD1L-202ENST00000369258 MFHAS1Q9Y4C4 1052 aa13.44□□□□□ -0.26
CHD1L-202ENST00000369258 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.43□□□□□ -0.26
CHD1L-202ENST00000369258 LOC100653049A0A140TA62 436 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms