RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 TM7SF2O76062 418 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 ZNF806P0C7X5 589 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 THRAP10827 490 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 HNRNPFP52597 415 aaKnown RBP10.78□□□□□ -0.68
PRDM1-201ENST00000369089 ITGA8P53708 1063 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 SPANXN2Q5MJ10 180 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 DCUN1D2Q6PH85 259 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 CCDC33Q8N5R6 958 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 GAB3Q8WWW8 586 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 GATA6Q92908 595 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 VPS33AQ96AX1 596 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 AK8Q96MA6 479 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 CPS1P31327 1500 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 OVOS2A0A0J9YW53 1432 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 OVOS2Q6IE36 1432 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 PFASO15067 1338 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 PJA2O43164 708 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 ICMTO60725 284 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 EDF1O60869 148 aaKnown RBP10.78□□□□□ -0.68
PRDM1-201ENST00000369089 ARHGEF15O94989 841 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 MARSP56192 900 aaKnown RBP10.78□□□□□ -0.68
PRDM1-201ENST00000369089 NCOA4Q13772 614 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 PDK4Q16654 411 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 PGS1Q32NB8 556 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 MFSD14BQ5SR56 506 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 SNRNP48Q6IEG0 339 aaKnown RBP10.78□□□□□ -0.68
PRDM1-201ENST00000369089 BPHLQ86WA6 291 aaPredicted RBP10.78□□□□□ -0.68
PRDM1-201ENST00000369089 SLC15A3Q8IY34 581 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 PROM2Q8N271 834 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 PHF21AQ96BD5 680 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 OR2B2Q9GZK3 357 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 GBA3Q9H227 469 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 STK32BQ9NY57 414 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 TAS2R1Q9NYW7 299 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 WHRNQ9P202 907 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 A0A0G2JPF8 293 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 HNRNPCL3B7ZW38 293 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 ECE2O60344 883 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 APBA3O96018 575 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 HSMCR30P0CW71 290 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 HNRNPCL4P0DMR1 293 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 COILP38432 576 aaPredicted RBP10.78□□□□□ -0.68
PRDM1-201ENST00000369089 KLK7P49862 253 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 BTG3Q14201 252 aaPredicted RBP10.78□□□□□ -0.68
PRDM1-201ENST00000369089 PCSK7Q16549 785 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 KRT39Q6A163 491 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 KRT25Q7Z3Z0 450 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 SCN3BQ9NY72 215 aa10.78□□□□□ -0.68
PRDM1-201ENST00000369089 KPNA7A9QM74 516 aa10.77□□□□□ -0.68
PRDM1-201ENST00000369089 H0YIN7 160 aa10.77□□□□□ -0.68
PRDM1-201ENST00000369089 PRKD3O94806 890 aa10.77□□□□□ -0.68
PRDM1-201ENST00000369089 NR4A1P22736 598 aa10.77□□□□□ -0.68
PRDM1-201ENST00000369089 SOX6P35712 828 aa10.77□□□□□ -0.68
PRDM1-201ENST00000369089 GTF2IP78347 998 aa10.77□□□□□ -0.68
PRDM1-201ENST00000369089 NFE2L1Q14494 772 aa10.77□□□□□ -0.68
PRDM1-201ENST00000369089 PHC2Q8IXK0 858 aa10.77□□□□□ -0.68
PRDM1-201ENST00000369089 CLEC4FQ8N1N0 589 aa10.77□□□□□ -0.68
PRDM1-201ENST00000369089 TDRD5Q8NAT2 981 aaKnown RBP10.77□□□□□ -0.68
PRDM1-201ENST00000369089 OSBP2Q969R2 916 aa10.77□□□□□ -0.68
PRDM1-201ENST00000369089 ASPSCR1Q9BZE9 553 aa10.77□□□□□ -0.68
PRDM1-201ENST00000369089 OCEL1Q9H607 264 aa10.77□□□□□ -0.68
PRDM1-201ENST00000369089 CRB1P82279 1406 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 ANKRD34BA5PLL1 514 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 MEI4A8MW99 385 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 J3QRK9 145 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 ITM2AO43736 263 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 ITGA4P13612 1032 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
PRDM1-201ENST00000369089 NR2F2P24468 414 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 PHKA2P46019 1235 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 NRF1Q16656 503 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 ARHGAP27Q6ZUM4 889 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 TPCN2Q8NHX9 752 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 ASZ1Q8WWH4 475 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 FBXL8Q96CD0 374 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 C6orf62Q9GZU0 229 aaPredicted RBP10.77□□□□□ -0.69
PRDM1-201ENST00000369089 GOLPH3Q9H4A6 298 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 SLC35C2Q9NQQ7 365 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 ARHGAP20Q9P2F6 1191 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 UBA2Q9UBT2 640 aaPredicted RBP10.77□□□□□ -0.69
PRDM1-201ENST00000369089 PSMD13Q9UNM6 376 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 ADGRB1O14514 1584 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 MYO3AQ8NEV4 1616 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 SAGE2PA6NJ88 616 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 B8ZZF3 427 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 ACSL4O60488 711 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 IFNA14P01570 189 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 KRT1P04264 644 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 PEX2P28328 305 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 HERC3Q15034 1050 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 CHI3L2Q15782 390 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 HLFQ16534 295 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 WDR72Q3MJ13 1102 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 RNF26Q9BY78 433 aaPredicted RBP10.77□□□□□ -0.69
PRDM1-201ENST00000369089 SERHL2Q9H4I8 314 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 ENTPD7Q9NQZ7 604 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 POLR3BQ9NW08 1133 aaPredicted RBP10.77□□□□□ -0.69
PRDM1-201ENST00000369089 ING3Q9NXR8 418 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 SORCS3Q9UPU3 1222 aa10.77□□□□□ -0.69
PRDM1-201ENST00000369089 DNM3Q9UQ16 869 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms