RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 TCP1P17987 556 aaKnown RBP9.3□□□□□ -0.92
SNX27-201ENST00000368838 CASQ1P31415 396 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 GPC5P78333 572 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 CNGA2Q16280 664 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 CLEC16AQ2KHT3 1053 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 USP41Q3LFD5 358 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 WDR72Q3MJ13 1102 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 ZNF569Q5MCW4 686 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 C9orf57Q5W0N0 161 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 LMBRD2Q68DH5 695 aaPredicted RBP9.3□□□□□ -0.92
SNX27-201ENST00000368838 ZNF572Q7Z3I7 529 aaPredicted RBP9.3□□□□□ -0.92
SNX27-201ENST00000368838 SLC47A2Q86VL8 602 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 TOP6BLQ8N6T0 577 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 LRRC57Q8N9N7 239 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 RBBP8NLQ8NC74 664 aaPredicted RBP9.3□□□□□ -0.92
SNX27-201ENST00000368838 CMASQ8NFW8 434 aaPredicted RBP9.3□□□□□ -0.92
SNX27-201ENST00000368838 STK32AQ8WU08 396 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 ZNF606Q8WXB4 792 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 CTNNBL1Q8WYA6 563 aaPredicted RBP9.3□□□□□ -0.92
SNX27-201ENST00000368838 WDR24Q96S15 920 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 NAPGQ99747 312 aaPredicted RBP9.3□□□□□ -0.92
SNX27-201ENST00000368838 PI4K2AQ9BTU6 479 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.3□□□□□ -0.92
SNX27-201ENST00000368838 SCUBE2Q9NQ36 999 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 CYLDQ9NQC7 956 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 CHST7Q9NS84 486 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 CDC23Q9UJX2 597 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 POLIQ9UNA4 740 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 DUSP12Q9UNI6 340 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 SSX2IPQ9Y2D8 614 aa9.3□□□□□ -0.92
SNX27-201ENST00000368838 EP300Q09472 2414 aaPredicted RBP9.29□□□□□ -0.92
SNX27-201ENST00000368838 ATG2BQ96BY7 2078 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 RALGAPA1Q6GYQ0 2036 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 ARHGEF37A1IGU5 675 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 KRBA1A5PL33 1030 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 TMEM189-UBE2V1I3L0A0 370 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 CCL16O15467 120 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 MED7O43513 233 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 VDRP11473 427 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 MMP8P22894 467 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 POLR2BP30876 1174 aaKnown RBP9.29□□□□□ -0.92
SNX27-201ENST00000368838 RPL34P49207 117 aaKnown RBP9.29□□□□□ -0.92
SNX27-201ENST00000368838 CLCN5P51795 746 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 OSTNP61366 133 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 NOMO3P69849 1222 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 ARID5AQ03989 594 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 PDE4CQ08493 712 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 TUSC3Q13454 348 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 PSMD5Q16401 504 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 WHAMMP3Q1A5X7 153 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 SV2CQ496J9 727 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 ARHGAP17Q68EM7 881 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 SPOPLQ6IQ16 392 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 C11orf63Q6NUN7 778 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 TMEM270Q6UE05 265 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 GRASPQ7Z6J2 395 aaPredicted RBP9.29□□□□□ -0.92
SNX27-201ENST00000368838 SLC35F6Q8N357 371 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 MYRIPQ8NFW9 859 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 WHAMMQ8TF30 809 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 PCDHB18PQ96TA0 734 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 RPP25Q9BUL9 199 aaKnown RBP9.29□□□□□ -0.92
SNX27-201ENST00000368838 MIS12Q9H081 205 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 GOLGA2P5Q9HBQ8 144 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 WDR35Q9P2L0 1181 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 STK39Q9UEW8 545 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 GUCA1BQ9UMX6 200 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 AGAP1Q9UPQ3 857 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 MRFAP1Q9Y605 127 aa9.29□□□□□ -0.92
SNX27-201ENST00000368838 GVINP1Q7Z2Y8 2422 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 SF3B1O75533 1304 aaKnown RBP eCLIP9.28□□□□□ -0.924e-7■■■■■ 133.7
SNX27-201ENST00000368838 KPNA7A9QM74 516 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 GABRDO14764 452 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 ABL1P00519 1130 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 FTLP02792 175 aaPredicted RBP9.28□□□□□ -0.92
SNX27-201ENST00000368838 CYP11A1P05108 521 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 THP07101 528 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 AOC1P19801 751 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 GNA15P30679 374 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 SCNN1AP37088 669 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 TAF6P49848 677 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 RAD23BP54727 409 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 PTP4A2Q12974 167 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 MEI1Q5TIA1 1274 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 PLEKHA7Q6IQ23 1121 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 LILRA6Q6PI73 481 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 ELMSAN1Q6PJG2 1045 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 ARCQ7LC44 396 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 MCOLN2Q8IZK6 566 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 TMEM86AQ8N2M4 240 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 TMEM130Q8N3G9 435 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 SLC44A3Q8N4M1 653 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 TMEM35BQ8NCS4 154 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 TPCN2Q8NHX9 752 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 GPR152Q8TDT2 470 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 FNIP1Q8TF40 1166 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 TMEM176AQ96HP8 235 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 CLSTN3Q9BQT9 956 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 TTPALQ9BTX7 342 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 NT5C1AQ9BXI3 368 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 IRX2Q9BZI1 471 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms