RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 GTF2H1P32780 548 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 USP8P40818 1118 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 TERF1P54274 439 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 MLLT6P55198 1093 aaPredicted RBP10.58□□□□□ -0.72
TPM3-210ENST00000368530 TWF1Q12792 350 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 BIRC3Q13489 604 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 CTXN3Q4LDR2 81 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 PDZD4Q76G19 769 aaPredicted RBP10.58□□□□□ -0.72
TPM3-210ENST00000368530 APBB1IPQ7Z5R6 666 aaPredicted RBP10.58□□□□□ -0.72
TPM3-210ENST00000368530 DNAAF5Q86Y56 855 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 TMC8Q8IU68 726 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 MFSD6LQ8IWD5 586 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 PPM1KQ8N3J5 372 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 FBXL13Q8NEE6 735 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 IRF7Q92985 503 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 NT5C1BQ96P26 610 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 LMAN1LQ9HAT1 526 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 RAB20Q9NX57 234 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 TUBGCP4Q9UGJ1 667 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 ADAMTS1Q9UHI8 967 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 OGTO15294 1046 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 PMM2O15305 246 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 PRKCIP41743 596 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 PIK3CAP42336 1068 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 AARSP49588 968 aaKnown RBP eCLIP10.58□□□□□ -0.72
TPM3-210ENST00000368530 TEAD2Q15562 447 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 SLC18A3Q16572 532 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 CYP4A22Q5TCH4 519 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 OR5B17Q8NGF7 314 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 SHKBP1Q8TBC3 707 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 ZSCAN18Q8TBC5 510 aaPredicted RBP10.58□□□□□ -0.72
TPM3-210ENST00000368530 FAM3CQ92520 227 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 SECISBP2LQ93073 1101 aaKnown RBP10.58□□□□□ -0.72
TPM3-210ENST00000368530 TATDN2Q93075 761 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 ZNF512Q96ME7 567 aaPredicted RBP10.58□□□□□ -0.72
TPM3-210ENST00000368530 KREMEN1Q96MU8 473 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 CNTNAP3BQ96NU0 1288 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 LRRC3BQ96PB8 259 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 CGRRF1Q99675 332 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 PACSIN1Q9BY11 444 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 CNTNAP3Q9BZ76 1288 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 TSGA10Q9BZW7 698 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 SEPT11Q9NVA2 429 aaKnown RBP10.58□□□□□ -0.72
TPM3-210ENST00000368530 NUB1Q9Y5A7 615 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 BZW2Q9Y6E2 419 aaKnown RBP10.58□□□□□ -0.72
TPM3-210ENST00000368530 PIAS3Q9Y6X2 628 aa10.58□□□□□ -0.72
TPM3-210ENST00000368530 SPTBN2O15020 2390 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 CTAGE9A4FU28 777 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 HEPACAM2A8MVW5 462 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 PRR5-ARHGAP8B1AHC4 643 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 HRO43593 1189 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 FAM189A1O60320 539 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 PHACTR2O75167 634 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 MOCS3O95396 460 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 HLA-DRAP01903 254 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 SDHBP21912 280 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 LRPAP1P30533 357 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 HOXC13P31276 330 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 MCCD1P59942 119 aaPredicted RBP10.57□□□□□ -0.72
TPM3-210ENST00000368530 ARHGAP8P85298 464 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 SATB1Q01826 763 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 LMNB2Q03252 620 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 MCL1Q07820 350 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 DMWDQ09019 674 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 FCHO2Q0JRZ9 810 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 TDRD10Q5VZ19 366 aaKnown RBP10.57□□□□□ -0.72
TPM3-210ENST00000368530 SPOPLQ6IQ16 392 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 ZNF280DQ6N043 979 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 VPS36Q86VN1 386 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 BRSK2Q8IWQ3 736 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 LRRN4CLQ8ND94 238 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 APPL2Q8NEU8 664 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 DEPDC1BQ8WUY9 529 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 NAPGQ99747 312 aaPredicted RBP10.57□□□□□ -0.72
TPM3-210ENST00000368530 IER2Q9BTL4 223 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 MYO1AQ9UBC5 1043 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 COQ4Q9Y3A0 265 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 DAAM1Q9Y4D1 1078 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 YIPF1Q9Y548 306 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 TIMM13Q9Y5L4 95 aaPredicted RBP10.57□□□□□ -0.72
TPM3-210ENST00000368530 CITO14578 2027 aa10.57□□□□□ -0.72
TPM3-210ENST00000368530 TPRP12270 2363 aaKnown RBP10.56□□□□□ -0.72
TPM3-210ENST00000368530 DCDC2BA2VCK2 349 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 TMCO5BA8MYB1 307 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 K7ESF4 209 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 DDX3XO00571 662 aaKnown RBP eCLIP10.56□□□□□ -0.72
TPM3-210ENST00000368530 ENC1O14682 589 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 BUB1O43683 1085 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 SLU7O95391 586 aaKnown RBP10.56□□□□□ -0.72
TPM3-210ENST00000368530 VNN1O95497 513 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 C4BPAP04003 597 aaKnown RBP10.56□□□□□ -0.72
TPM3-210ENST00000368530 OR4Q2P0C623 313 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 MYL4P12829 197 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 NRLP54845 237 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 MFAP3P55082 362 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 NAP1L1P55209 391 aaKnown RBP10.56□□□□□ -0.72
TPM3-210ENST00000368530 CLDN10P78369 228 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 ENPEPQ07075 957 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 GPR17Q13304 367 aa10.56□□□□□ -0.72
TPM3-210ENST00000368530 ZACNQ401N2 412 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms