RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 CA4P22748 312 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 RPL34P49207 117 aaKnown RBP10.66□□□□□ -0.7
TPM3-209ENST00000368527 MNAT1P51948 309 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 BCAT1P54687 386 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 CDH8P55286 799 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 BCAR1P56945 870 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 BST2Q10589 180 aaKnown RBP10.66□□□□□ -0.7
TPM3-209ENST00000368527 BNIP1Q12981 228 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 GRB14Q14449 540 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 ZBTB6Q15916 424 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 DBN1Q16643 649 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 GOLGA7BQ2TAP0 167 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 PKDCCQ504Y2 493 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 FBXW10Q5XX13 1052 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 SLC9A4Q6AI14 798 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 TXNRD3NBQ6F5E7 133 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 CYB5D1Q6P9G0 228 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 C3orf62Q6ZUJ4 267 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 SLC26A9Q7LBE3 791 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 CATSPER4Q7RTX7 472 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 DPP9Q86TI2 863 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 CCNJLQ8IV13 435 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 KIAA0319LQ8IZA0 1049 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 CYP4X1Q8N118 509 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 CRYBG2Q8N1P7 616 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 ARFGAP1Q8N6T3 406 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 OR6J1Q8NGC5 347 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 HSPH1Q92598 858 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 KAT2BQ92831 832 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 FAF2Q96CS3 445 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 MTBPQ96DY7 904 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 TNIP3Q96KP6 325 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 TWNKQ96RR1 684 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 PARK7Q99497 189 aaKnown RBP10.66□□□□□ -0.7
TPM3-209ENST00000368527 KATNBL1Q9H079 304 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 XAB2Q9HCS7 855 aaKnown RBP10.66□□□□□ -0.7
TPM3-209ENST00000368527 PDGFCQ9NRA1 345 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.66□□□□□ -0.7
TPM3-209ENST00000368527 DNAJC17Q9NVM6 304 aaKnown RBP10.66□□□□□ -0.7
TPM3-209ENST00000368527 CNTN3Q9P232 1028 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 TBK1Q9UHD2 729 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 GTF2IRD1Q9UHL9 959 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 RABGEF1Q9UJ41 708 aa10.66□□□□□ -0.7
TPM3-209ENST00000368527 RPL26L1Q9UNX3 145 aaKnown RBP10.66□□□□□ -0.7
TPM3-209ENST00000368527 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.66□□□□□ -0.7
TPM3-209ENST00000368527 A6NJR5 290 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 H7C0C1 242 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 PDHXO00330 501 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 TYROBPO43914 113 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 GCATO75600 419 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 KRT37O76014 449 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 STK10O94804 968 aaKnown RBP10.65□□□□□ -0.7
TPM3-209ENST00000368527 ZBED1O96006 694 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 MT-ND3P03897 115 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 MMP3P08254 477 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 INHBAP08476 426 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 ZSCAN5DPP0CG00 497 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 TPSB2P20231 275 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 PAX3P23760 479 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 CNTFP26441 200 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 GCAP28676 217 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 ATP5OP48047 213 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 SERPINB9P50453 376 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 ZNF135P52742 658 aaPredicted RBP10.65□□□□□ -0.7
TPM3-209ENST00000368527 AIF1P55008 147 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 DYNLT1P63172 113 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 ZNF200P98182 395 aaPredicted RBP10.65□□□□□ -0.7
TPM3-209ENST00000368527 NAB1Q13506 487 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 KCNJ11Q14654 390 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 LRRC14Q15048 493 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 TPSAB1Q15661 275 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 SV2CQ496J9 727 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 EFHC1Q5JVL4 640 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 TMEM63BQ5T3F8 832 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 UBAP2Q5T6F2 1119 aaKnown RBP10.65□□□□□ -0.7
TPM3-209ENST00000368527 OLFML1Q6UWY5 402 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 FAM183BPQ6ZVS7 135 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 CYS1Q717R9 158 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 STRADAQ7RTN6 431 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 PLEKHH3Q7Z736 793 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 CHSY1Q86X52 802 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 TMEM192Q8IY95 271 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 NME8Q8N427 588 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 EMC1Q8N766 993 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 ANKRD52Q8NB46 1076 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 FBXO36Q8NEA4 188 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 CFAP61Q8NHU2 1237 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 SLC35F5Q8WV83 523 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 PAFAH2Q99487 392 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 FAM118BQ9BPY3 351 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 MKS1Q9NXB0 559 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 GDAP2Q9NXN4 497 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 CTNNAL1Q9UBT7 734 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 PCSK1NQ9UHG2 260 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 RAD54BQ9Y620 910 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 RALGAPA2Q2PPJ7 1873 aa10.65□□□□□ -0.7
TPM3-209ENST00000368527 ZNF236Q9UL36 1845 aa10.65□□□□□ -0.71
TPM3-209ENST00000368527 SF3B1O75533 1304 aaKnown RBP eCLIP10.64□□□□□ -0.717e-7■■■■■ 108.6
TPM3-209ENST00000368527 PLXNA1Q9UIW2 1896 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 E5RJQ4 531 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms