RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 MTAPQ13126 283 aa20.04■□□□□ 0.8
CKS1B-203ENST00000368439 PDGFRLQ15198 375 aa20.04■□□□□ 0.8
CKS1B-203ENST00000368439 EML3Q32P44 896 aa20.04■□□□□ 0.8
CKS1B-203ENST00000368439 CC2D1AQ6P1N0 951 aaPredicted RBP20.04■□□□□ 0.8
CKS1B-203ENST00000368439 HEXIM2Q96MH2 286 aaKnown RBP20.04■□□□□ 0.8
CKS1B-203ENST00000368439 DUSP16Q9BY84 665 aa20.04■□□□□ 0.8
CKS1B-203ENST00000368439 PNPLA8Q9NP80 782 aa20.04■□□□□ 0.8
CKS1B-203ENST00000368439 SPATA6Q9NWH7 488 aaPredicted RBP20.04■□□□□ 0.8
CKS1B-203ENST00000368439 GMIPQ9P107 970 aa20.04■□□□□ 0.8
CKS1B-203ENST00000368439 RWDD2AQ9UIY3 292 aa20.04■□□□□ 0.8
CKS1B-203ENST00000368439 WNT6Q9Y6F9 365 aa20.04■□□□□ 0.8
CKS1B-203ENST00000368439 P4HA2O15460 535 aa20.03■□□□□ 0.8
CKS1B-203ENST00000368439 GNA14O95837 355 aa20.03■□□□□ 0.8
CKS1B-203ENST00000368439 ABL1P00519 1130 aa20.03■□□□□ 0.8
CKS1B-203ENST00000368439 LRMPQ12912 555 aa20.03■□□□□ 0.8
CKS1B-203ENST00000368439 GAS6Q14393 721 aa20.03■□□□□ 0.8
CKS1B-203ENST00000368439 PON2Q15165 354 aa20.03■□□□□ 0.8
CKS1B-203ENST00000368439 ARHGAP17Q68EM7 881 aa20.03■□□□□ 0.8
CKS1B-203ENST00000368439 MAMSTRQ6ZN01 415 aa20.03■□□□□ 0.8
CKS1B-203ENST00000368439 ZFRQ96KR1 1074 aaKnown RBP20.03■□□□□ 0.8
CKS1B-203ENST00000368439 LINC00597Q9H2U6 94 aa20.03■□□□□ 0.8
CKS1B-203ENST00000368439 FBXO44Q9H4M3 255 aa20.03■□□□□ 0.8
CKS1B-203ENST00000368439 DUS2Q9NX74 493 aaKnown RBP20.03■□□□□ 0.8
CKS1B-203ENST00000368439 CPQQ9Y646 472 aa20.03■□□□□ 0.8
CKS1B-203ENST00000368439 COCHO43405 550 aa20.02■□□□□ 0.8
CKS1B-203ENST00000368439 TUBP50607 506 aa20.02■□□□□ 0.8
CKS1B-203ENST00000368439 KCNH2Q12809 1159 aa20.02■□□□□ 0.8
CKS1B-203ENST00000368439 CCINQ13939 588 aa20.02■□□□□ 0.8
CKS1B-203ENST00000368439 HECTD3Q5T447 861 aa20.02■□□□□ 0.8
CKS1B-203ENST00000368439 KIAA1958Q8N8K9 716 aa20.02■□□□□ 0.8
CKS1B-203ENST00000368439 CCSER2Q9H7U1 834 aa20.02■□□□□ 0.8
CKS1B-203ENST00000368439 ECT2Q9H8V3 914 aa20.02■□□□□ 0.8
CKS1B-203ENST00000368439 PRMT8Q9NR22 394 aaPredicted RBP20.02■□□□□ 0.8
CKS1B-203ENST00000368439 RBM12Q9NTZ6 932 aaKnown RBP20.02■□□□□ 0.8
CKS1B-203ENST00000368439 FBXO4Q9UKT5 387 aa20.02■□□□□ 0.8
CKS1B-203ENST00000368439 SCML2Q9UQR0 700 aa20.02■□□□□ 0.8
CKS1B-203ENST00000368439 MYOFQ9NZM1 2061 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 ACO1P21399 889 aaKnown RBP20.01■□□□□ 0.79
CKS1B-203ENST00000368439 TBXAS1P24557 533 aaPredicted RBP20.01■□□□□ 0.79
CKS1B-203ENST00000368439 GJA4P35212 333 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 KIF11P52732 1056 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 ZNF528Q3MIS6 628 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 IRF2BP1Q8IU81 584 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 MLKLQ8NB16 471 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 TTC16Q8NEE8 873 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 KAT5Q92993 513 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 JAKMIP2Q96AA8 810 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 IER2Q9BTL4 223 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 DNAI2Q9GZS0 605 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 OSER1Q9NX31 292 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 SMPD4Q9NXE4 827 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 USP3Q9Y6I4 520 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 KIAA1549LQ6ZVL6 1849 aa20.01■□□□□ 0.79
CKS1B-203ENST00000368439 ZFHX2Q9C0A1 2572 aaPredicted RBP20■□□□□ 0.79
CKS1B-203ENST00000368439 TRDMT1O14717 391 aaKnown RBP20■□□□□ 0.79
CKS1B-203ENST00000368439 CYP26A1O43174 497 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 LAMTOR5O43504 91 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 MBL2P11226 248 aaPredicted RBP20■□□□□ 0.79
CKS1B-203ENST00000368439 IFNAR2P48551 515 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 TMEM196Q5HYL7 178 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 DGKKQ5KSL6 1271 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 NAIF1Q69YI7 327 aaPredicted RBP20■□□□□ 0.79
CKS1B-203ENST00000368439 FSTL4Q6MZW2 842 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 Q6ZS52 159 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 TTC30AQ86WT1 665 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 EHBP1Q8NDI1 1231 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 NELL1Q92832 810 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 ATP2A3Q93084 1043 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 NT5C1BQ96P26 610 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 UBXN6Q9BZV1 441 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 NMUR1Q9HB89 426 aa20■□□□□ 0.79
CKS1B-203ENST00000368439 FBRSL1Q9HCM7 1045 aaKnown RBP20■□□□□ 0.79
CKS1B-203ENST00000368439 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20■□□□□ 0.79
CKS1B-203ENST00000368439 ATG2BQ96BY7 2078 aa19.99■□□□□ 0.79
CKS1B-203ENST00000368439 AFPP02771 609 aaKnown RBP19.99■□□□□ 0.79
CKS1B-203ENST00000368439 CCDC192P0DO97 292 aa19.99■□□□□ 0.79
CKS1B-203ENST00000368439 TDGF1P13385 188 aa19.99■□□□□ 0.79
CKS1B-203ENST00000368439 YWHAEP62258 255 aaKnown RBP19.99■□□□□ 0.79
CKS1B-203ENST00000368439 LRRC32Q14392 662 aa19.99■□□□□ 0.79
CKS1B-203ENST00000368439 GAB4Q2WGN9 574 aa19.99■□□□□ 0.79
CKS1B-203ENST00000368439 ARHGEF19Q8IW93 802 aa19.99■□□□□ 0.79
CKS1B-203ENST00000368439 CPA6Q8N4T0 437 aa19.99■□□□□ 0.79
CKS1B-203ENST00000368439 ANKRD52Q8NB46 1076 aa19.99■□□□□ 0.79
CKS1B-203ENST00000368439 NUP62CLQ9H1M0 184 aa19.99■□□□□ 0.79
CKS1B-203ENST00000368439 CYLDQ9NQC7 956 aa19.99■□□□□ 0.79
CKS1B-203ENST00000368439 TLR8Q9NR97 1041 aaKnown RBP19.99■□□□□ 0.79
CKS1B-203ENST00000368439 CFAP97Q9P2B7 532 aa19.99■□□□□ 0.79
CKS1B-203ENST00000368439 RNF225M0QZC1 329 aaPredicted RBP19.98■□□□□ 0.79
CKS1B-203ENST00000368439 TLR5O60602 858 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 FGFR1OPO95684 399 aaKnown RBP19.98■□□□□ 0.79
CKS1B-203ENST00000368439 GALK1P51570 392 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 CSTF1Q05048 431 aaKnown RBP19.98■□□□□ 0.79
CKS1B-203ENST00000368439 CETN1Q12798 172 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 DPCR1Q3MIW9 517 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 RAB41Q5JT25 222 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 TSSK4Q6SA08 328 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 ASCL5Q7RTU5 278 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 CCDC186Q7Z3E2 898 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 SCD5Q86SK9 330 aa19.98■□□□□ 0.79
CKS1B-203ENST00000368439 DDX42Q86XP3 938 aaKnown RBP eCLIP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms