RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 I3L4J1 428 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 H6PDO95479 791 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 ESRRBO95718 433 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 RALAP11233 206 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 ITGAXP20702 1163 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 TFAP4Q01664 338 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 NSUN2Q08J23 767 aaKnown RBP eCLIP13.64□□□□□ -0.23
NCSTN-202ENST00000368063 TUBB3Q13509 450 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 DENND5BQ6ZUT9 1274 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 CLVS1Q8IUQ0 354 aaPredicted RBP13.64□□□□□ -0.23
NCSTN-202ENST00000368063 ANKMY2Q8IV38 441 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 WDR75Q8IWA0 830 aaKnown RBP13.64□□□□□ -0.23
NCSTN-202ENST00000368063 ZNF713Q8N859 430 aaPredicted RBP13.64□□□□□ -0.23
NCSTN-202ENST00000368063 HEMGNQ9BXL5 484 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 CEP44Q9C0F1 390 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 NYXQ9GZU5 481 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 HIPK3Q9H422 1215 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 ACSS3Q9H6R3 686 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 ZNF395Q9H8N7 513 aaPredicted RBP13.64□□□□□ -0.23
NCSTN-202ENST00000368063 DCP1AQ9NPI6 582 aaPredicted RBP13.64□□□□□ -0.23
NCSTN-202ENST00000368063 EXOC7Q9UPT5 735 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 PSMC3P17980 439 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 GLRA2P23416 452 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 KCNA1Q09470 495 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 NR1D2Q14995 579 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 RGS21Q2M5E4 152 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 XKR5Q6UX68 686 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 LMO3Q8TAP4 145 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 RUSC1Q9BVN2 902 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 CLK4Q9HAZ1 481 aaKnown RBP13.64□□□□□ -0.23
NCSTN-202ENST00000368063 CYP4F11Q9HBI6 524 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 KCNQ5Q9NR82 932 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 MARCOQ9UEW3 520 aaPredicted RBP13.64□□□□□ -0.23
NCSTN-202ENST00000368063 MTMR7Q9Y216 660 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 ERGIC3Q9Y282 383 aa13.64□□□□□ -0.23
NCSTN-202ENST00000368063 MYO3BQ8WXR4 1341 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 A0A1W2PQ67 120 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 H3BNH8 94 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 TGFB1I1O43294 461 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 ATE1O95260 518 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 BMP10O95393 424 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 MT-ND3P03897 115 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 ZSCAN5DPP0CG00 497 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 CCDC130P13994 396 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 RFX1P22670 979 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 SSTR1P30872 391 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 PEX3P56589 373 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 TXNL4AP83876 142 aaKnown RBP13.63□□□□□ -0.23
NCSTN-202ENST00000368063 E2F2Q14209 437 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 MORF4L2Q15014 288 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 SF3B4Q15427 424 aaKnown RBP eCLIP13.63□□□□□ -0.231e-6■■■□□ 18.9
NCSTN-202ENST00000368063 MIER3Q7Z3K6 550 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 NACC2Q96BF6 587 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 THAP11Q96EK4 314 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 LRGUKQ96M69 825 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 NAP1L4Q99733 375 aaKnown RBP13.63□□□□□ -0.23
NCSTN-202ENST00000368063 OLFM1Q99784 485 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 SH3GL1Q99961 368 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 NOCTQ9UK39 431 aaKnown RBP13.63□□□□□ -0.23
NCSTN-202ENST00000368063 ERVK-11Q9UQG0 969 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 ITM2BQ9Y287 266 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 GNPATO15228 680 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 KITP10721 976 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 PSMC2P35998 433 aaKnown RBP13.63□□□□□ -0.23
NCSTN-202ENST00000368063 IGBP1P78318 339 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 KLHL38Q2WGJ6 581 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 RNASEH2BQ5TBB1 312 aaKnown RBP13.63□□□□□ -0.23
NCSTN-202ENST00000368063 GSTA5Q7RTV2 222 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 ZNF34Q8IZ26 560 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 DEFB107AQ8IZN7 70 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 LILRA2Q8N149 483 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 GSDMBQ8TAX9 411 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 NLRP7Q8WX94 980 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 ATP2A3Q93084 1043 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 RILPQ96NA2 401 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 MECRQ9BV79 373 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 TMOD3Q9NYL9 352 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 GPRC5DQ9NZD1 345 aa13.63□□□□□ -0.23
NCSTN-202ENST00000368063 TRIM49P0CI25 452 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 TRIM49CP0CI26 452 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 MYL7Q01449 175 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 EEPD1Q7L9B9 569 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 TANKQ92844 425 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 TAMM41Q96BW9 452 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 REEP2Q9BRK0 252 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 WDR83Q9BRX9 315 aaKnown RBP13.62□□□□□ -0.23
NCSTN-202ENST00000368063 ZNF341Q9BYN7 854 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 GCOM2Q9BZD3 368 aaPredicted RBP13.62□□□□□ -0.23
NCSTN-202ENST00000368063 IKZF4Q9H2S9 585 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 ZFYVE28Q9HCC9 887 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 VPS51Q9UID3 782 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 N6AMT1Q9Y5N5 214 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 ITGB4P16144 1822 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 J3QRK9 145 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 PCYT1AP49585 367 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 BMXP51813 675 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 MOGQ16653 247 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 ZFPM1Q8IX07 1006 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 HELQQ8TDG4 1101 aa13.62□□□□□ -0.23
NCSTN-202ENST00000368063 EPS8L1Q8TE68 723 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms